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Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes
This work includes the original data used to discover the gene ontology bias in transcriptomic analysis conducted by microarray and high throughput sequencing (Zhang et al., 2015) [1]. In the analysis, housekeeping genes were used to examine the differential detection ability by microarray and seque...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4706559/ https://www.ncbi.nlm.nih.gov/pubmed/26858976 http://dx.doi.org/10.1016/j.dib.2015.11.045 |
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author | Zhang, Yijuan Akintola, Oluwafemi S. Liu, Ken J.A. Sun, Bingyun |
author_facet | Zhang, Yijuan Akintola, Oluwafemi S. Liu, Ken J.A. Sun, Bingyun |
author_sort | Zhang, Yijuan |
collection | PubMed |
description | This work includes the original data used to discover the gene ontology bias in transcriptomic analysis conducted by microarray and high throughput sequencing (Zhang et al., 2015) [1]. In the analysis, housekeeping genes were used to examine the differential detection ability by microarray and sequencing because these genes are probably the most reliably detected. The genes included here were compiled from 15 human housekeeping gene studies. The provided tables here comprise of detailed chromosomal location, detection breadth, normalized expression level, exon count, total exon length, and total intron length of each concerned gene and their related transcripts. We hope this information can help researchers better understand the differences in gene ontology-bias we discussed (Zhang et al., 2015) [1] and can encourage further improvement on these two technology platforms. |
format | Online Article Text |
id | pubmed-4706559 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-47065592016-02-08 Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes Zhang, Yijuan Akintola, Oluwafemi S. Liu, Ken J.A. Sun, Bingyun Data Brief Data Article This work includes the original data used to discover the gene ontology bias in transcriptomic analysis conducted by microarray and high throughput sequencing (Zhang et al., 2015) [1]. In the analysis, housekeeping genes were used to examine the differential detection ability by microarray and sequencing because these genes are probably the most reliably detected. The genes included here were compiled from 15 human housekeeping gene studies. The provided tables here comprise of detailed chromosomal location, detection breadth, normalized expression level, exon count, total exon length, and total intron length of each concerned gene and their related transcripts. We hope this information can help researchers better understand the differences in gene ontology-bias we discussed (Zhang et al., 2015) [1] and can encourage further improvement on these two technology platforms. Elsevier 2015-11-27 /pmc/articles/PMC4706559/ /pubmed/26858976 http://dx.doi.org/10.1016/j.dib.2015.11.045 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Data Article Zhang, Yijuan Akintola, Oluwafemi S. Liu, Ken J.A. Sun, Bingyun Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title | Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title_full | Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title_fullStr | Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title_full_unstemmed | Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title_short | Detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
title_sort | detection bias in microarray and sequencing transcriptomic analysis identified by housekeeping genes |
topic | Data Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4706559/ https://www.ncbi.nlm.nih.gov/pubmed/26858976 http://dx.doi.org/10.1016/j.dib.2015.11.045 |
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