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Role of Lung Function Genes in the Development of Asthma

Although our previous GWAS failed to identify SNPs associated with pulmonary function at the level of genomewide significance, it did show that the heritability for FEV(1)/FVC was 41.6% in a Japanese population, suggesting that the heritability of pulmonary function traits can be explained by the ad...

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Autores principales: Yamada, Hideyasu, Masuko, Hironori, Yatagai, Yohei, Sakamoto, Tohru, Kaneko, Yoshiko, Iijima, Hiroaki, Naito, Takashi, Noguchi, Emiko, Konno, Satoshi, Nishimura, Masaharu, Hirota, Tomomitsu, Tamari, Mayumi, Hizawa, Nobuyuki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4709100/
https://www.ncbi.nlm.nih.gov/pubmed/26752288
http://dx.doi.org/10.1371/journal.pone.0145832
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author Yamada, Hideyasu
Masuko, Hironori
Yatagai, Yohei
Sakamoto, Tohru
Kaneko, Yoshiko
Iijima, Hiroaki
Naito, Takashi
Noguchi, Emiko
Konno, Satoshi
Nishimura, Masaharu
Hirota, Tomomitsu
Tamari, Mayumi
Hizawa, Nobuyuki
author_facet Yamada, Hideyasu
Masuko, Hironori
Yatagai, Yohei
Sakamoto, Tohru
Kaneko, Yoshiko
Iijima, Hiroaki
Naito, Takashi
Noguchi, Emiko
Konno, Satoshi
Nishimura, Masaharu
Hirota, Tomomitsu
Tamari, Mayumi
Hizawa, Nobuyuki
author_sort Yamada, Hideyasu
collection PubMed
description Although our previous GWAS failed to identify SNPs associated with pulmonary function at the level of genomewide significance, it did show that the heritability for FEV(1)/FVC was 41.6% in a Japanese population, suggesting that the heritability of pulmonary function traits can be explained by the additive effects of multiple common SNPs. In addition, our previous study indicated that pulmonary function genes identified in previous GWASs in non-Japanese populations accounted for 4.3% to 12.0% of the entire estimated heritability of FEV(1)/FVC in a Japanese population. Therefore, given that many loci with individual weak effects may contribute to asthma risk, in this study, we created a quantitative score of genetic load based on 16 SNPs implicated in lower lung function in both Japanese and non-Japanese populations. This genetic risk score (GRS) for lower FEV(1)/FVC was consistently associated with the onset of asthma (P = 9.6 × 10(−4)) in 2 independent Japanese populations as well as with the onset of COPD (P = 0.042). Clustering of asthma patients based on GRS levels indicated that an increased GRS may be responsible for the development of a particular phenotype of asthma characterized by early onset, atopy, and severer airflow obstruction.
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spelling pubmed-47091002016-01-15 Role of Lung Function Genes in the Development of Asthma Yamada, Hideyasu Masuko, Hironori Yatagai, Yohei Sakamoto, Tohru Kaneko, Yoshiko Iijima, Hiroaki Naito, Takashi Noguchi, Emiko Konno, Satoshi Nishimura, Masaharu Hirota, Tomomitsu Tamari, Mayumi Hizawa, Nobuyuki PLoS One Research Article Although our previous GWAS failed to identify SNPs associated with pulmonary function at the level of genomewide significance, it did show that the heritability for FEV(1)/FVC was 41.6% in a Japanese population, suggesting that the heritability of pulmonary function traits can be explained by the additive effects of multiple common SNPs. In addition, our previous study indicated that pulmonary function genes identified in previous GWASs in non-Japanese populations accounted for 4.3% to 12.0% of the entire estimated heritability of FEV(1)/FVC in a Japanese population. Therefore, given that many loci with individual weak effects may contribute to asthma risk, in this study, we created a quantitative score of genetic load based on 16 SNPs implicated in lower lung function in both Japanese and non-Japanese populations. This genetic risk score (GRS) for lower FEV(1)/FVC was consistently associated with the onset of asthma (P = 9.6 × 10(−4)) in 2 independent Japanese populations as well as with the onset of COPD (P = 0.042). Clustering of asthma patients based on GRS levels indicated that an increased GRS may be responsible for the development of a particular phenotype of asthma characterized by early onset, atopy, and severer airflow obstruction. Public Library of Science 2016-01-11 /pmc/articles/PMC4709100/ /pubmed/26752288 http://dx.doi.org/10.1371/journal.pone.0145832 Text en © 2016 Yamada et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Yamada, Hideyasu
Masuko, Hironori
Yatagai, Yohei
Sakamoto, Tohru
Kaneko, Yoshiko
Iijima, Hiroaki
Naito, Takashi
Noguchi, Emiko
Konno, Satoshi
Nishimura, Masaharu
Hirota, Tomomitsu
Tamari, Mayumi
Hizawa, Nobuyuki
Role of Lung Function Genes in the Development of Asthma
title Role of Lung Function Genes in the Development of Asthma
title_full Role of Lung Function Genes in the Development of Asthma
title_fullStr Role of Lung Function Genes in the Development of Asthma
title_full_unstemmed Role of Lung Function Genes in the Development of Asthma
title_short Role of Lung Function Genes in the Development of Asthma
title_sort role of lung function genes in the development of asthma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4709100/
https://www.ncbi.nlm.nih.gov/pubmed/26752288
http://dx.doi.org/10.1371/journal.pone.0145832
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