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High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods

Phaseolibacter flectens strain ATCC 12775(T) (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as...

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Autores principales: Aizenberg-Gershtein, Yana, Izhaki, Ido, Lapidus, Alla, Copeland, Alex, Reddy, TBK, Huntemann, Marcel, Pillay, Manoj, Markowitz, Victor, Göker, Markus, Woyke, Tanja, Klenk, Hans-Peter, Kyrpides, Nikos C., Halpern, Malka
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710985/
https://www.ncbi.nlm.nih.gov/pubmed/26767091
http://dx.doi.org/10.1186/s40793-015-0127-5
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author Aizenberg-Gershtein, Yana
Izhaki, Ido
Lapidus, Alla
Copeland, Alex
Reddy, TBK
Huntemann, Marcel
Pillay, Manoj
Markowitz, Victor
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Kyrpides, Nikos C.
Halpern, Malka
author_facet Aizenberg-Gershtein, Yana
Izhaki, Ido
Lapidus, Alla
Copeland, Alex
Reddy, TBK
Huntemann, Marcel
Pillay, Manoj
Markowitz, Victor
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Kyrpides, Nikos C.
Halpern, Malka
author_sort Aizenberg-Gershtein, Yana
collection PubMed
description Phaseolibacter flectens strain ATCC 12775(T) (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes study. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0127-5) contains supplementary material, which is available to authorized users.
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spelling pubmed-47109852016-01-14 High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods Aizenberg-Gershtein, Yana Izhaki, Ido Lapidus, Alla Copeland, Alex Reddy, TBK Huntemann, Marcel Pillay, Manoj Markowitz, Victor Göker, Markus Woyke, Tanja Klenk, Hans-Peter Kyrpides, Nikos C. Halpern, Malka Stand Genomic Sci Short Genome Report Phaseolibacter flectens strain ATCC 12775(T) (Halpern et al., Int J Syst Evol Microbiol 63:268–273, 2013) is a Gram-negative, rod shaped, motile, aerobic, chemoorganotroph bacterium. Ph. flectens is as a plant-pathogenic bacterium on pods of French bean and was first identified by Johnson (1956) as Pseudomonas flectens. After its phylogenetic position was reexamined, Pseudomonas flectens was transferred to the family Enterobacteriaceae as Phaseolibacter flectens gen. nov., comb. nov. Here we describe the features of this organism, together with the draft genome sequence and annotation. The DNA GC content is 44.34 mol%. The chromosome length is 2,748,442 bp. It encodes 2,437 proteins and 89 RNA genes. Ph. flectens genome is part of the Genomic Encyclopedia of Type Strains, Phase I: the one thousand microbial genomes study. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s40793-015-0127-5) contains supplementary material, which is available to authorized users. BioMed Central 2016-01-13 /pmc/articles/PMC4710985/ /pubmed/26767091 http://dx.doi.org/10.1186/s40793-015-0127-5 Text en © Aizenberg-Gershtein et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Aizenberg-Gershtein, Yana
Izhaki, Ido
Lapidus, Alla
Copeland, Alex
Reddy, TBK
Huntemann, Marcel
Pillay, Manoj
Markowitz, Victor
Göker, Markus
Woyke, Tanja
Klenk, Hans-Peter
Kyrpides, Nikos C.
Halpern, Malka
High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title_full High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title_fullStr High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title_full_unstemmed High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title_short High quality permanent draft genome sequence of Phaseolibacter flectens ATCC 12775(T), a plant pathogen of French bean pods
title_sort high quality permanent draft genome sequence of phaseolibacter flectens atcc 12775(t), a plant pathogen of french bean pods
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710985/
https://www.ncbi.nlm.nih.gov/pubmed/26767091
http://dx.doi.org/10.1186/s40793-015-0127-5
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