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Noise reduction of diffusion tensor images by sparse representation and dictionary learning

BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this...

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Detalles Bibliográficos
Autores principales: Kong, Youyong, Li, Yuanjin, Wu, Jiasong, Shu, Huazhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710997/
https://www.ncbi.nlm.nih.gov/pubmed/26758740
http://dx.doi.org/10.1186/s12938-015-0116-3
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author Kong, Youyong
Li, Yuanjin
Wu, Jiasong
Shu, Huazhong
author_facet Kong, Youyong
Li, Yuanjin
Wu, Jiasong
Shu, Huazhong
author_sort Kong, Youyong
collection PubMed
description BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this study, the context redundancy among the adjacent slices of the diffusion weighted imaging volumes is utilized to train sparsifying dictionaries. Therefore, higher redundancy could be achieved for better description of image with lower computation complexity. The optimization problem is solved efficiently using an iterative block-coordinate relaxation method. RESULTS: The effectiveness of our proposed method has been assessed on both simulated and real experimental DTI datasets. Qualitative and quantitative evaluations demonstrate the performance of the proposed method on the simulated data. The experiments on real datasets with different b-values also show the effectiveness of the proposed method for noise reduction of DTI. CONCLUSIONS: The proposed approach well removes the noise in the DTI, which has high potential to be applied for clinical oncology applications.
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spelling pubmed-47109972016-01-14 Noise reduction of diffusion tensor images by sparse representation and dictionary learning Kong, Youyong Li, Yuanjin Wu, Jiasong Shu, Huazhong Biomed Eng Online Research BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this study, the context redundancy among the adjacent slices of the diffusion weighted imaging volumes is utilized to train sparsifying dictionaries. Therefore, higher redundancy could be achieved for better description of image with lower computation complexity. The optimization problem is solved efficiently using an iterative block-coordinate relaxation method. RESULTS: The effectiveness of our proposed method has been assessed on both simulated and real experimental DTI datasets. Qualitative and quantitative evaluations demonstrate the performance of the proposed method on the simulated data. The experiments on real datasets with different b-values also show the effectiveness of the proposed method for noise reduction of DTI. CONCLUSIONS: The proposed approach well removes the noise in the DTI, which has high potential to be applied for clinical oncology applications. BioMed Central 2016-01-13 /pmc/articles/PMC4710997/ /pubmed/26758740 http://dx.doi.org/10.1186/s12938-015-0116-3 Text en © Kong et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Kong, Youyong
Li, Yuanjin
Wu, Jiasong
Shu, Huazhong
Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title_full Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title_fullStr Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title_full_unstemmed Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title_short Noise reduction of diffusion tensor images by sparse representation and dictionary learning
title_sort noise reduction of diffusion tensor images by sparse representation and dictionary learning
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710997/
https://www.ncbi.nlm.nih.gov/pubmed/26758740
http://dx.doi.org/10.1186/s12938-015-0116-3
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