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Noise reduction of diffusion tensor images by sparse representation and dictionary learning
BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710997/ https://www.ncbi.nlm.nih.gov/pubmed/26758740 http://dx.doi.org/10.1186/s12938-015-0116-3 |
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author | Kong, Youyong Li, Yuanjin Wu, Jiasong Shu, Huazhong |
author_facet | Kong, Youyong Li, Yuanjin Wu, Jiasong Shu, Huazhong |
author_sort | Kong, Youyong |
collection | PubMed |
description | BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this study, the context redundancy among the adjacent slices of the diffusion weighted imaging volumes is utilized to train sparsifying dictionaries. Therefore, higher redundancy could be achieved for better description of image with lower computation complexity. The optimization problem is solved efficiently using an iterative block-coordinate relaxation method. RESULTS: The effectiveness of our proposed method has been assessed on both simulated and real experimental DTI datasets. Qualitative and quantitative evaluations demonstrate the performance of the proposed method on the simulated data. The experiments on real datasets with different b-values also show the effectiveness of the proposed method for noise reduction of DTI. CONCLUSIONS: The proposed approach well removes the noise in the DTI, which has high potential to be applied for clinical oncology applications. |
format | Online Article Text |
id | pubmed-4710997 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-47109972016-01-14 Noise reduction of diffusion tensor images by sparse representation and dictionary learning Kong, Youyong Li, Yuanjin Wu, Jiasong Shu, Huazhong Biomed Eng Online Research BACKGROUND: The low quality of diffusion tensor image (DTI) could affect the accuracy of oncology diagnosis. METHODS: We present a novel sparse representation based denoising method for three dimensional DTI by learning adaptive dictionary with the context redundancy between neighbor slices. In this study, the context redundancy among the adjacent slices of the diffusion weighted imaging volumes is utilized to train sparsifying dictionaries. Therefore, higher redundancy could be achieved for better description of image with lower computation complexity. The optimization problem is solved efficiently using an iterative block-coordinate relaxation method. RESULTS: The effectiveness of our proposed method has been assessed on both simulated and real experimental DTI datasets. Qualitative and quantitative evaluations demonstrate the performance of the proposed method on the simulated data. The experiments on real datasets with different b-values also show the effectiveness of the proposed method for noise reduction of DTI. CONCLUSIONS: The proposed approach well removes the noise in the DTI, which has high potential to be applied for clinical oncology applications. BioMed Central 2016-01-13 /pmc/articles/PMC4710997/ /pubmed/26758740 http://dx.doi.org/10.1186/s12938-015-0116-3 Text en © Kong et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Kong, Youyong Li, Yuanjin Wu, Jiasong Shu, Huazhong Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title | Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title_full | Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title_fullStr | Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title_full_unstemmed | Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title_short | Noise reduction of diffusion tensor images by sparse representation and dictionary learning |
title_sort | noise reduction of diffusion tensor images by sparse representation and dictionary learning |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4710997/ https://www.ncbi.nlm.nih.gov/pubmed/26758740 http://dx.doi.org/10.1186/s12938-015-0116-3 |
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