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Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270

The Pseudomonas fluorescens strain UM270 was isolated form the rhizosphere of wild Medicago spp. A previous work has shown that this pseudomonad isolate was able to produce diverse diffusible and volatile compounds involved in plant protection and growth promotion. Here, we present the draft genome...

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Autores principales: Hernández-Salmerón, Julie E., Hernández-León, Rocio, Orozco-Mosqueda, Ma. Del Carmen, Valencia-Cantero, Eduardo, Moreno-Hagelsieb, Gabriel, Santoyo, Gustavo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4711069/
https://www.ncbi.nlm.nih.gov/pubmed/26767092
http://dx.doi.org/10.1186/s40793-015-0123-9
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author Hernández-Salmerón, Julie E.
Hernández-León, Rocio
Orozco-Mosqueda, Ma. Del Carmen
Valencia-Cantero, Eduardo
Moreno-Hagelsieb, Gabriel
Santoyo, Gustavo
author_facet Hernández-Salmerón, Julie E.
Hernández-León, Rocio
Orozco-Mosqueda, Ma. Del Carmen
Valencia-Cantero, Eduardo
Moreno-Hagelsieb, Gabriel
Santoyo, Gustavo
author_sort Hernández-Salmerón, Julie E.
collection PubMed
description The Pseudomonas fluorescens strain UM270 was isolated form the rhizosphere of wild Medicago spp. A previous work has shown that this pseudomonad isolate was able to produce diverse diffusible and volatile compounds involved in plant protection and growth promotion. Here, we present the draft genome sequence of the rhizobacterium P. fluorescens strain UM270. The sequence covers 6,047,974 bp of a single chromosome, with 62.66 % G + C content and no plasmids. Genome annotations predicted 5,509 genes, 5,396 coding genes, 59 RNA genes and 110 pseudogenes. Genome sequence analysis revealed the presence of genes involved in biological control and plant-growth promoting activities. We anticipate that the P. fluorescens strain UM270 genome will contribute insights about bacterial plant protection and beneficial properties through genomic comparisons among fluorescent pseudomonads.
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spelling pubmed-47110692016-01-14 Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270 Hernández-Salmerón, Julie E. Hernández-León, Rocio Orozco-Mosqueda, Ma. Del Carmen Valencia-Cantero, Eduardo Moreno-Hagelsieb, Gabriel Santoyo, Gustavo Stand Genomic Sci Short Genome Report The Pseudomonas fluorescens strain UM270 was isolated form the rhizosphere of wild Medicago spp. A previous work has shown that this pseudomonad isolate was able to produce diverse diffusible and volatile compounds involved in plant protection and growth promotion. Here, we present the draft genome sequence of the rhizobacterium P. fluorescens strain UM270. The sequence covers 6,047,974 bp of a single chromosome, with 62.66 % G + C content and no plasmids. Genome annotations predicted 5,509 genes, 5,396 coding genes, 59 RNA genes and 110 pseudogenes. Genome sequence analysis revealed the presence of genes involved in biological control and plant-growth promoting activities. We anticipate that the P. fluorescens strain UM270 genome will contribute insights about bacterial plant protection and beneficial properties through genomic comparisons among fluorescent pseudomonads. BioMed Central 2016-01-13 /pmc/articles/PMC4711069/ /pubmed/26767092 http://dx.doi.org/10.1186/s40793-015-0123-9 Text en © Hernández-Salmerón et al. 2015 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Hernández-Salmerón, Julie E.
Hernández-León, Rocio
Orozco-Mosqueda, Ma. Del Carmen
Valencia-Cantero, Eduardo
Moreno-Hagelsieb, Gabriel
Santoyo, Gustavo
Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title_full Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title_fullStr Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title_full_unstemmed Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title_short Draft Genome Sequence of the Biocontrol and Plant Growth-Promoting Rhizobacterium Pseudomonas fluorescens strain UM270
title_sort draft genome sequence of the biocontrol and plant growth-promoting rhizobacterium pseudomonas fluorescens strain um270
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4711069/
https://www.ncbi.nlm.nih.gov/pubmed/26767092
http://dx.doi.org/10.1186/s40793-015-0123-9
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