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Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer

With recent technological advances at synchrotrons [Graber et al., J. Synchrotron Radiat. 18, 658–670 (2011)], it is feasible to rapidly collect time-resolved crystallographic data at multiple temperature settings [Schmidt et al., Acta Crystallogr. D 69, 2534–2542 (2013)], from which barriers of act...

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Autores principales: Schmidt, Marius, Saldin, Dilano K.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Crystallographic Association 2014
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4711602/
https://www.ncbi.nlm.nih.gov/pubmed/26798774
http://dx.doi.org/10.1063/1.4869472
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author Schmidt, Marius
Saldin, Dilano K.
author_facet Schmidt, Marius
Saldin, Dilano K.
author_sort Schmidt, Marius
collection PubMed
description With recent technological advances at synchrotrons [Graber et al., J. Synchrotron Radiat. 18, 658–670 (2011)], it is feasible to rapidly collect time-resolved crystallographic data at multiple temperature settings [Schmidt et al., Acta Crystallogr. D 69, 2534–2542 (2013)], from which barriers of activation can be extracted. With the advent of fourth generation X-ray sources, new opportunities emerge to investigate structure and dynamics of biological macromolecules in real time [M. Schmidt, Adv. Condens. Matter Phys. 2013, 1–10] in crystals and potentially from single molecules in random orientation in solution [Poon et al., Adv. Condens. Matter Phys. 2013, 750371]. Kinetic data from time-resolved experiments on short time-scales must be interpreted in terms of chemical kinetics [Steinfeld et al., Chemical Kinetics and Dynamics, 2nd ed. (Prentience Hall, 1985)] and tied to existing time-resolved experiments on longer time-scales [Schmidt et al., Acta Crystallogr. D 69, 2534–2542 (2013); Jung et al., Nat. Chem. 5, 212–220 (2013)]. With this article, we will review and outline steps that are required to routinely determine the energetics of reactions in biomolecules in crystal and solution with newest X-ray sources. In eight sections, we aim to describe concepts and experimental details that may help to inspire new approaches to collect and interpret these data.
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spelling pubmed-47116022016-01-21 Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer Schmidt, Marius Saldin, Dilano K. Struct Dyn ARTICLES With recent technological advances at synchrotrons [Graber et al., J. Synchrotron Radiat. 18, 658–670 (2011)], it is feasible to rapidly collect time-resolved crystallographic data at multiple temperature settings [Schmidt et al., Acta Crystallogr. D 69, 2534–2542 (2013)], from which barriers of activation can be extracted. With the advent of fourth generation X-ray sources, new opportunities emerge to investigate structure and dynamics of biological macromolecules in real time [M. Schmidt, Adv. Condens. Matter Phys. 2013, 1–10] in crystals and potentially from single molecules in random orientation in solution [Poon et al., Adv. Condens. Matter Phys. 2013, 750371]. Kinetic data from time-resolved experiments on short time-scales must be interpreted in terms of chemical kinetics [Steinfeld et al., Chemical Kinetics and Dynamics, 2nd ed. (Prentience Hall, 1985)] and tied to existing time-resolved experiments on longer time-scales [Schmidt et al., Acta Crystallogr. D 69, 2534–2542 (2013); Jung et al., Nat. Chem. 5, 212–220 (2013)]. With this article, we will review and outline steps that are required to routinely determine the energetics of reactions in biomolecules in crystal and solution with newest X-ray sources. In eight sections, we aim to describe concepts and experimental details that may help to inspire new approaches to collect and interpret these data. American Crystallographic Association 2014-03-27 /pmc/articles/PMC4711602/ /pubmed/26798774 http://dx.doi.org/10.1063/1.4869472 Text en © 2014 Author(s). 2329-7778/2014/1(2)/024701/14 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution 3.0 Unported License.
spellingShingle ARTICLES
Schmidt, Marius
Saldin, Dilano K.
Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title_full Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title_fullStr Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title_full_unstemmed Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title_short Enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
title_sort enzyme transient state kinetics in crystal and solution from the perspective of a time-resolved crystallographer
topic ARTICLES
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4711602/
https://www.ncbi.nlm.nih.gov/pubmed/26798774
http://dx.doi.org/10.1063/1.4869472
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