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Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification
OBJECTIVES: To propose and evaluate a method to reduce variability in emphysema quantification among different computed tomography (CT) reconstructions by normalizing CT data reconstructed with varying kernels. METHODS: We included 369 subjects from the COPDGene study. For each subject, spirometry a...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4712239/ https://www.ncbi.nlm.nih.gov/pubmed/26002132 http://dx.doi.org/10.1007/s00330-015-3824-y |
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author | Gallardo-Estrella, Leticia Lynch, David A. Prokop, Mathias Stinson, Douglas Zach, Jordan Judy, Philip F. van Ginneken, Bram van Rikxoort, Eva M. |
author_facet | Gallardo-Estrella, Leticia Lynch, David A. Prokop, Mathias Stinson, Douglas Zach, Jordan Judy, Philip F. van Ginneken, Bram van Rikxoort, Eva M. |
author_sort | Gallardo-Estrella, Leticia |
collection | PubMed |
description | OBJECTIVES: To propose and evaluate a method to reduce variability in emphysema quantification among different computed tomography (CT) reconstructions by normalizing CT data reconstructed with varying kernels. METHODS: We included 369 subjects from the COPDGene study. For each subject, spirometry and a chest CT reconstructed with two kernels were obtained using two different scanners. Normalization was performed by frequency band decomposition with hierarchical unsharp masking to standardize the energy in each band to a reference value. Emphysema scores (ES), the percentage of lung voxels below -950 HU, were computed before and after normalization. Bland-Altman analysis and correlation between ES and spirometry before and after normalization were compared. Two mixed cohorts, containing data from all scanners and kernels, were created to simulate heterogeneous acquisition parameters. RESULTS: The average difference in ES between kernels decreased for the scans obtained with both scanners after normalization (7.7 ± 2.7 to 0.3 ± 0.7; 7.2 ± 3.8 to -0.1 ± 0.5). Correlation coefficients between ES and FEV(1), and FEV(1)/FVC increased significantly for the mixed cohorts. CONCLUSIONS: Normalization of chest CT data reduces variation in emphysema quantification due to reconstruction filters and improves correlation between ES and spirometry. KEY POINTS: • Emphysema quantification is sensitive to the reconstruction kernel used. • Normalization allows comparison of emphysema quantification from images reconstructed with varying kernels. • Normalization allows comparison of emphysema quantification obtained with scanners from different manufacturers. • Normalization improves correlation of emphysema quantification with spirometry. • Normalization can be used to compare data from different studies and centers. |
format | Online Article Text |
id | pubmed-4712239 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-47122392016-01-19 Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification Gallardo-Estrella, Leticia Lynch, David A. Prokop, Mathias Stinson, Douglas Zach, Jordan Judy, Philip F. van Ginneken, Bram van Rikxoort, Eva M. Eur Radiol Chest OBJECTIVES: To propose and evaluate a method to reduce variability in emphysema quantification among different computed tomography (CT) reconstructions by normalizing CT data reconstructed with varying kernels. METHODS: We included 369 subjects from the COPDGene study. For each subject, spirometry and a chest CT reconstructed with two kernels were obtained using two different scanners. Normalization was performed by frequency band decomposition with hierarchical unsharp masking to standardize the energy in each band to a reference value. Emphysema scores (ES), the percentage of lung voxels below -950 HU, were computed before and after normalization. Bland-Altman analysis and correlation between ES and spirometry before and after normalization were compared. Two mixed cohorts, containing data from all scanners and kernels, were created to simulate heterogeneous acquisition parameters. RESULTS: The average difference in ES between kernels decreased for the scans obtained with both scanners after normalization (7.7 ± 2.7 to 0.3 ± 0.7; 7.2 ± 3.8 to -0.1 ± 0.5). Correlation coefficients between ES and FEV(1), and FEV(1)/FVC increased significantly for the mixed cohorts. CONCLUSIONS: Normalization of chest CT data reduces variation in emphysema quantification due to reconstruction filters and improves correlation between ES and spirometry. KEY POINTS: • Emphysema quantification is sensitive to the reconstruction kernel used. • Normalization allows comparison of emphysema quantification from images reconstructed with varying kernels. • Normalization allows comparison of emphysema quantification obtained with scanners from different manufacturers. • Normalization improves correlation of emphysema quantification with spirometry. • Normalization can be used to compare data from different studies and centers. Springer Berlin Heidelberg 2015-05-23 2016 /pmc/articles/PMC4712239/ /pubmed/26002132 http://dx.doi.org/10.1007/s00330-015-3824-y Text en © The Author(s) 2015 Open Access This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 International License (http://creativecommons.org/licenses/by-nc/4.0/), which permits any noncommercial use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Chest Gallardo-Estrella, Leticia Lynch, David A. Prokop, Mathias Stinson, Douglas Zach, Jordan Judy, Philip F. van Ginneken, Bram van Rikxoort, Eva M. Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title | Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title_full | Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title_fullStr | Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title_full_unstemmed | Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title_short | Normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
title_sort | normalizing computed tomography data reconstructed with different filter kernels: effect on emphysema quantification |
topic | Chest |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4712239/ https://www.ncbi.nlm.nih.gov/pubmed/26002132 http://dx.doi.org/10.1007/s00330-015-3824-y |
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