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Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Pensoft Publishers
2015
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4714352/ https://www.ncbi.nlm.nih.gov/pubmed/26798311 http://dx.doi.org/10.3897/zookeys.546.5964 |
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author | Zhao, Linlin Gao, Tianxiang Lu, Weihua |
author_facet | Zhao, Linlin Gao, Tianxiang Lu, Weihua |
author_sort | Zhao, Linlin |
collection | PubMed |
description | Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes) as well as a control region (CR) as other bony fishes. Within the control region, we identified the (ETAS), the central conserved sequence block domain (CSB-D, SCB-E and CSB-F) and the conserved sequence block domain (CSB-1, CSB-2 and CSB-3). Phylogenetic analyses revealed that Bahaba taipingensis is more closely related to Pseudosciaeniae than Argyrosominae and Sciaeninae. Additionally, Bahaba taipingensis is the sister taxon of Miichthys miiuy, and those two are sister to Collichthys plus Larimichthys. |
format | Online Article Text |
id | pubmed-4714352 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | Pensoft Publishers |
record_format | MEDLINE/PubMed |
spelling | pubmed-47143522016-01-21 Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications Zhao, Linlin Gao, Tianxiang Lu, Weihua Zookeys Research Article Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes) as well as a control region (CR) as other bony fishes. Within the control region, we identified the (ETAS), the central conserved sequence block domain (CSB-D, SCB-E and CSB-F) and the conserved sequence block domain (CSB-1, CSB-2 and CSB-3). Phylogenetic analyses revealed that Bahaba taipingensis is more closely related to Pseudosciaeniae than Argyrosominae and Sciaeninae. Additionally, Bahaba taipingensis is the sister taxon of Miichthys miiuy, and those two are sister to Collichthys plus Larimichthys. Pensoft Publishers 2015-12-16 /pmc/articles/PMC4714352/ /pubmed/26798311 http://dx.doi.org/10.3897/zookeys.546.5964 Text en Linlin Zhao, Tianxiang Gao, Weihua Lu http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Zhao, Linlin Gao, Tianxiang Lu, Weihua Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications |
title | Complete mitochondrial DNA sequence of the endangered fish (Bahaba
taipingensis): Mitogenome characterization and phylogenetic implications |
title_full | Complete mitochondrial DNA sequence of the endangered fish (Bahaba
taipingensis): Mitogenome characterization and phylogenetic implications |
title_fullStr | Complete mitochondrial DNA sequence of the endangered fish (Bahaba
taipingensis): Mitogenome characterization and phylogenetic implications |
title_full_unstemmed | Complete mitochondrial DNA sequence of the endangered fish (Bahaba
taipingensis): Mitogenome characterization and phylogenetic implications |
title_short | Complete mitochondrial DNA sequence of the endangered fish (Bahaba
taipingensis): Mitogenome characterization and phylogenetic implications |
title_sort | complete mitochondrial dna sequence of the endangered fish (bahaba
taipingensis): mitogenome characterization and phylogenetic implications |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4714352/ https://www.ncbi.nlm.nih.gov/pubmed/26798311 http://dx.doi.org/10.3897/zookeys.546.5964 |
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