Cargando…

Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications

Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhao, Linlin, Gao, Tianxiang, Lu, Weihua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Pensoft Publishers 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4714352/
https://www.ncbi.nlm.nih.gov/pubmed/26798311
http://dx.doi.org/10.3897/zookeys.546.5964
_version_ 1782410302077272064
author Zhao, Linlin
Gao, Tianxiang
Lu, Weihua
author_facet Zhao, Linlin
Gao, Tianxiang
Lu, Weihua
author_sort Zhao, Linlin
collection PubMed
description Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes) as well as a control region (CR) as other bony fishes. Within the control region, we identified the (ETAS), the central conserved sequence block domain (CSB-D, SCB-E and CSB-F) and the conserved sequence block domain (CSB-1, CSB-2 and CSB-3). Phylogenetic analyses revealed that Bahaba taipingensis is more closely related to Pseudosciaeniae than Argyrosominae and Sciaeninae. Additionally, Bahaba taipingensis is the sister taxon of Miichthys miiuy, and those two are sister to Collichthys plus Larimichthys.
format Online
Article
Text
id pubmed-4714352
institution National Center for Biotechnology Information
language English
publishDate 2015
publisher Pensoft Publishers
record_format MEDLINE/PubMed
spelling pubmed-47143522016-01-21 Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications Zhao, Linlin Gao, Tianxiang Lu, Weihua Zookeys Research Article Abstract. To understand the systematic status of Bahaba taipingensis within Sciaenidae, the complete mitochondrial genome (mitogenome) sequence of Chinese bahaba has recently been determined by long PCR and primer walking methods. The complete mitochondrial genome is 16500 bp in length and contains 37 mitochondrial genes (13 protein-coding genes, 2 ribosomal RNA genes and 22 transfer RNA genes) as well as a control region (CR) as other bony fishes. Within the control region, we identified the (ETAS), the central conserved sequence block domain (CSB-D, SCB-E and CSB-F) and the conserved sequence block domain (CSB-1, CSB-2 and CSB-3). Phylogenetic analyses revealed that Bahaba taipingensis is more closely related to Pseudosciaeniae than Argyrosominae and Sciaeninae. Additionally, Bahaba taipingensis is the sister taxon of Miichthys miiuy, and those two are sister to Collichthys plus Larimichthys. Pensoft Publishers 2015-12-16 /pmc/articles/PMC4714352/ /pubmed/26798311 http://dx.doi.org/10.3897/zookeys.546.5964 Text en Linlin Zhao, Tianxiang Gao, Weihua Lu http://creativecommons.org/licenses/by/4.0 This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Zhao, Linlin
Gao, Tianxiang
Lu, Weihua
Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title_full Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title_fullStr Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title_full_unstemmed Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title_short Complete mitochondrial DNA sequence of the endangered fish (Bahaba taipingensis): Mitogenome characterization and phylogenetic implications
title_sort complete mitochondrial dna sequence of the endangered fish (bahaba taipingensis): mitogenome characterization and phylogenetic implications
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4714352/
https://www.ncbi.nlm.nih.gov/pubmed/26798311
http://dx.doi.org/10.3897/zookeys.546.5964
work_keys_str_mv AT zhaolinlin completemitochondrialdnasequenceoftheendangeredfishbahabataipingensismitogenomecharacterizationandphylogeneticimplications
AT gaotianxiang completemitochondrialdnasequenceoftheendangeredfishbahabataipingensismitogenomecharacterizationandphylogeneticimplications
AT luweihua completemitochondrialdnasequenceoftheendangeredfishbahabataipingensismitogenomecharacterizationandphylogeneticimplications