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Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois)
The tarnished plant bug (TPB), Lygus lineolaris (Palisot de Beauvois) is a polyphagous, phytophagous insect that has emerged as a major pest of cotton, alfalfa, fruits, and vegetable crops in the eastern United States and Canada. Using its piercing-sucking mouthparts, TPB employs a “lacerate and flu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4720363/ https://www.ncbi.nlm.nih.gov/pubmed/26789269 http://dx.doi.org/10.1371/journal.pone.0147197 |
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author | Showmaker, Kurt C. Bednářová, Andrea Gresham, Cathy Hsu, Chuan-Yu Peterson, Daniel G. Krishnan, Natraj |
author_facet | Showmaker, Kurt C. Bednářová, Andrea Gresham, Cathy Hsu, Chuan-Yu Peterson, Daniel G. Krishnan, Natraj |
author_sort | Showmaker, Kurt C. |
collection | PubMed |
description | The tarnished plant bug (TPB), Lygus lineolaris (Palisot de Beauvois) is a polyphagous, phytophagous insect that has emerged as a major pest of cotton, alfalfa, fruits, and vegetable crops in the eastern United States and Canada. Using its piercing-sucking mouthparts, TPB employs a “lacerate and flush” feeding strategy in which saliva injected into plant tissue degrades cell wall components and lyses cells whose contents are subsequently imbibed by the TPB. It is known that a major component of TPB saliva is the polygalacturonase enzymes that degrade the pectin in the cell walls. However, not much is known about the other components of the saliva of this important pest. In this study, we explored the salivary gland transcriptome of TPB using Illumina sequencing. After in silico conversion of RNA sequences into corresponding polypeptides, 25,767 putative proteins were discovered. Of these, 19,540 (78.83%) showed significant similarity to known proteins in the either the NCBI nr or Uniprot databases. Gene ontology (GO) terms were assigned to 7,512 proteins, and 791 proteins in the sialotranscriptome of TPB were found to collectively map to 107 Kyoto Encyclopedia of Genes and Genomes (KEGG) database pathways. A total of 3,653 Pfam domains were identified in 10,421 sialotranscriptome predicted proteins resulting in 12,814 Pfam annotations; some proteins had more than one Pfam domain. Functional annotation revealed a number of salivary gland proteins that potentially facilitate degradation of host plant tissues and mitigation of the host plant defense response. These transcripts/proteins and their potential roles in TPB establishment are described. |
format | Online Article Text |
id | pubmed-4720363 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47203632016-01-30 Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) Showmaker, Kurt C. Bednářová, Andrea Gresham, Cathy Hsu, Chuan-Yu Peterson, Daniel G. Krishnan, Natraj PLoS One Research Article The tarnished plant bug (TPB), Lygus lineolaris (Palisot de Beauvois) is a polyphagous, phytophagous insect that has emerged as a major pest of cotton, alfalfa, fruits, and vegetable crops in the eastern United States and Canada. Using its piercing-sucking mouthparts, TPB employs a “lacerate and flush” feeding strategy in which saliva injected into plant tissue degrades cell wall components and lyses cells whose contents are subsequently imbibed by the TPB. It is known that a major component of TPB saliva is the polygalacturonase enzymes that degrade the pectin in the cell walls. However, not much is known about the other components of the saliva of this important pest. In this study, we explored the salivary gland transcriptome of TPB using Illumina sequencing. After in silico conversion of RNA sequences into corresponding polypeptides, 25,767 putative proteins were discovered. Of these, 19,540 (78.83%) showed significant similarity to known proteins in the either the NCBI nr or Uniprot databases. Gene ontology (GO) terms were assigned to 7,512 proteins, and 791 proteins in the sialotranscriptome of TPB were found to collectively map to 107 Kyoto Encyclopedia of Genes and Genomes (KEGG) database pathways. A total of 3,653 Pfam domains were identified in 10,421 sialotranscriptome predicted proteins resulting in 12,814 Pfam annotations; some proteins had more than one Pfam domain. Functional annotation revealed a number of salivary gland proteins that potentially facilitate degradation of host plant tissues and mitigation of the host plant defense response. These transcripts/proteins and their potential roles in TPB establishment are described. Public Library of Science 2016-01-20 /pmc/articles/PMC4720363/ /pubmed/26789269 http://dx.doi.org/10.1371/journal.pone.0147197 Text en © 2016 Showmaker et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Showmaker, Kurt C. Bednářová, Andrea Gresham, Cathy Hsu, Chuan-Yu Peterson, Daniel G. Krishnan, Natraj Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title | Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title_full | Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title_fullStr | Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title_full_unstemmed | Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title_short | Insight into the Salivary Gland Transcriptome of Lygus lineolaris (Palisot de Beauvois) |
title_sort | insight into the salivary gland transcriptome of lygus lineolaris (palisot de beauvois) |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4720363/ https://www.ncbi.nlm.nih.gov/pubmed/26789269 http://dx.doi.org/10.1371/journal.pone.0147197 |
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