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Optical scatter patterns facilitate rapid differentiation of E nterobacteriaceae on CHROMagar(TM) Orientation medium
E nterobacteriaceae family comprised pathogens and commensals and has a significant impact on food safety and public health. E nterobacteriaceae is often enumerated and presumptively identified on chromogenic media, such as CHROMagar(TM) Orientation medium based on colony profile; however, classific...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2015
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4720409/ https://www.ncbi.nlm.nih.gov/pubmed/26503189 http://dx.doi.org/10.1111/1751-7915.12323 |
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author | Singh, Atul K. Bhunia, Arun K. |
author_facet | Singh, Atul K. Bhunia, Arun K. |
author_sort | Singh, Atul K. |
collection | PubMed |
description | E nterobacteriaceae family comprised pathogens and commensals and has a significant impact on food safety and public health. E nterobacteriaceae is often enumerated and presumptively identified on chromogenic media, such as CHROMagar(TM) Orientation medium based on colony profile; however, classification is highly arbitrary, and some could not be differentiated due to similar chromogen production. Here, we investigated the ability of the laser optical sensor, BARDOT (bacterial rapid detection using optical scattering technology) for rapid screening and differentiation of colonies of the major bacterial genera from E nterobacteriaceae on CHROMagar(TM) Orientation. A total of 36 strains representing 12 genera and 15 species were used to generate colony scatter image library that comprised 1683 scatter images. This library was used to differentiate mixed cultures of E nterobacteriaceae family – K lebsiella pneumoniae, E nterobacter spp., C itrobacter freundii and S erratia marcescens (KECS group); P roteus mirabilis, M organella morganii and P rovidencia rettgeri (PMP group); and non‐E nterobacteriaceae family: P seudomonas aeruginosa, A cinetobacter spp. and S taphylococcus aureus (PAS group) – and data show high accuracy (83–100%) for intra‐group classification of colonies in 10–22 h or even before visible production of chromogens. BARDOT successfully differentiated the major genera, including the ones that do not produce visually distinguishable chromogens on CHROMagar(TM) Orientation, providing a label‐free, real‐time on‐plate colony screening tool for E nterobacteriaceae. |
format | Online Article Text |
id | pubmed-4720409 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2015 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-47204092016-01-29 Optical scatter patterns facilitate rapid differentiation of E nterobacteriaceae on CHROMagar(TM) Orientation medium Singh, Atul K. Bhunia, Arun K. Microb Biotechnol Brief Report E nterobacteriaceae family comprised pathogens and commensals and has a significant impact on food safety and public health. E nterobacteriaceae is often enumerated and presumptively identified on chromogenic media, such as CHROMagar(TM) Orientation medium based on colony profile; however, classification is highly arbitrary, and some could not be differentiated due to similar chromogen production. Here, we investigated the ability of the laser optical sensor, BARDOT (bacterial rapid detection using optical scattering technology) for rapid screening and differentiation of colonies of the major bacterial genera from E nterobacteriaceae on CHROMagar(TM) Orientation. A total of 36 strains representing 12 genera and 15 species were used to generate colony scatter image library that comprised 1683 scatter images. This library was used to differentiate mixed cultures of E nterobacteriaceae family – K lebsiella pneumoniae, E nterobacter spp., C itrobacter freundii and S erratia marcescens (KECS group); P roteus mirabilis, M organella morganii and P rovidencia rettgeri (PMP group); and non‐E nterobacteriaceae family: P seudomonas aeruginosa, A cinetobacter spp. and S taphylococcus aureus (PAS group) – and data show high accuracy (83–100%) for intra‐group classification of colonies in 10–22 h or even before visible production of chromogens. BARDOT successfully differentiated the major genera, including the ones that do not produce visually distinguishable chromogens on CHROMagar(TM) Orientation, providing a label‐free, real‐time on‐plate colony screening tool for E nterobacteriaceae. John Wiley and Sons Inc. 2015-10-27 /pmc/articles/PMC4720409/ /pubmed/26503189 http://dx.doi.org/10.1111/1751-7915.12323 Text en © 2015 The Authors. Microbial Biotechnology published by John Wiley & Sons Ltd and Society for Applied Microbiology. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Brief Report Singh, Atul K. Bhunia, Arun K. Optical scatter patterns facilitate rapid differentiation of E nterobacteriaceae on CHROMagar(TM) Orientation medium |
title | Optical scatter patterns facilitate rapid differentiation of E
nterobacteriaceae on CHROMagar(TM) Orientation medium |
title_full | Optical scatter patterns facilitate rapid differentiation of E
nterobacteriaceae on CHROMagar(TM) Orientation medium |
title_fullStr | Optical scatter patterns facilitate rapid differentiation of E
nterobacteriaceae on CHROMagar(TM) Orientation medium |
title_full_unstemmed | Optical scatter patterns facilitate rapid differentiation of E
nterobacteriaceae on CHROMagar(TM) Orientation medium |
title_short | Optical scatter patterns facilitate rapid differentiation of E
nterobacteriaceae on CHROMagar(TM) Orientation medium |
title_sort | optical scatter patterns facilitate rapid differentiation of e
nterobacteriaceae on chromagar(tm) orientation medium |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4720409/ https://www.ncbi.nlm.nih.gov/pubmed/26503189 http://dx.doi.org/10.1111/1751-7915.12323 |
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