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Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia
Background. The clinical significance of viruses detected in patients with community-acquired pneumonia (CAP) is often unclear. Methods. We conducted a prospective study to identify the prevalence of 13 viruses in the upper respiratory tract of patients with CAP and concurrently enrolled asymptomati...
Autores principales: | , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4721902/ https://www.ncbi.nlm.nih.gov/pubmed/26180044 http://dx.doi.org/10.1093/infdis/jiv323 |
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author | Self, Wesley H. Williams, Derek J. Zhu, Yuwei Ampofo, Krow Pavia, Andrew T. Chappell, James D. Hymas, Weston C. Stockmann, Chris Bramley, Anna M. Schneider, Eileen Erdman, Dean Finelli, Lyn Jain, Seema Edwards, Kathryn M. Grijalva, Carlos G. |
author_facet | Self, Wesley H. Williams, Derek J. Zhu, Yuwei Ampofo, Krow Pavia, Andrew T. Chappell, James D. Hymas, Weston C. Stockmann, Chris Bramley, Anna M. Schneider, Eileen Erdman, Dean Finelli, Lyn Jain, Seema Edwards, Kathryn M. Grijalva, Carlos G. |
author_sort | Self, Wesley H. |
collection | PubMed |
description | Background. The clinical significance of viruses detected in patients with community-acquired pneumonia (CAP) is often unclear. Methods. We conducted a prospective study to identify the prevalence of 13 viruses in the upper respiratory tract of patients with CAP and concurrently enrolled asymptomatic controls with real-time reverse-transcriptase polymerase chain reaction. We compared age-stratified prevalence of each virus between patients with CAP and controls and used multivariable logistic regression to calculate attributable fractions (AFs). Results. We enrolled 1024 patients with CAP and 759 controls. Detections of influenza, respiratory syncytial virus, and human metapneumovirus were substantially more common in patients with CAP of all ages than in controls (AFs near 1.0). Parainfluenza and coronaviruses were also more common among patients with CAP (AF, 0.5–0.75). Rhinovirus was associated with CAP among adults (AF, 0.93) but not children (AF, 0.02). Adenovirus was associated with CAP only among children <2 years old (AF, 0.77). Conclusions. The probability that a virus detected with real-time reverse-transcriptase polymerase chain reaction in patients with CAP contributed to symptomatic disease varied by age group and specific virus. Detections of influenza, respiratory syncytial virus, and human metapneumovirus among patients with CAP of all ages probably indicate an etiologic role, whereas detections of parainfluenza, coronaviruses, rhinovirus, and adenovirus, especially in children, require further scrutiny. |
format | Online Article Text |
id | pubmed-4721902 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47219022017-02-15 Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia Self, Wesley H. Williams, Derek J. Zhu, Yuwei Ampofo, Krow Pavia, Andrew T. Chappell, James D. Hymas, Weston C. Stockmann, Chris Bramley, Anna M. Schneider, Eileen Erdman, Dean Finelli, Lyn Jain, Seema Edwards, Kathryn M. Grijalva, Carlos G. J Infect Dis Major Articles and Brief Reports Background. The clinical significance of viruses detected in patients with community-acquired pneumonia (CAP) is often unclear. Methods. We conducted a prospective study to identify the prevalence of 13 viruses in the upper respiratory tract of patients with CAP and concurrently enrolled asymptomatic controls with real-time reverse-transcriptase polymerase chain reaction. We compared age-stratified prevalence of each virus between patients with CAP and controls and used multivariable logistic regression to calculate attributable fractions (AFs). Results. We enrolled 1024 patients with CAP and 759 controls. Detections of influenza, respiratory syncytial virus, and human metapneumovirus were substantially more common in patients with CAP of all ages than in controls (AFs near 1.0). Parainfluenza and coronaviruses were also more common among patients with CAP (AF, 0.5–0.75). Rhinovirus was associated with CAP among adults (AF, 0.93) but not children (AF, 0.02). Adenovirus was associated with CAP only among children <2 years old (AF, 0.77). Conclusions. The probability that a virus detected with real-time reverse-transcriptase polymerase chain reaction in patients with CAP contributed to symptomatic disease varied by age group and specific virus. Detections of influenza, respiratory syncytial virus, and human metapneumovirus among patients with CAP of all ages probably indicate an etiologic role, whereas detections of parainfluenza, coronaviruses, rhinovirus, and adenovirus, especially in children, require further scrutiny. Oxford University Press 2016-02-15 2015-07-14 /pmc/articles/PMC4721902/ /pubmed/26180044 http://dx.doi.org/10.1093/infdis/jiv323 Text en © The Author 2015. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail journals.permissions@oup.com. This article is made available via the PMC Open Access Subset for unrestricted re-use and analyses in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the COVID-19 pandemic or until permissions are revoked in writing. Upon expiration of these permissions, PMC is granted a perpetual license to make this article available via PMC and Europe PMC, consistent with existing copyright protections. |
spellingShingle | Major Articles and Brief Reports Self, Wesley H. Williams, Derek J. Zhu, Yuwei Ampofo, Krow Pavia, Andrew T. Chappell, James D. Hymas, Weston C. Stockmann, Chris Bramley, Anna M. Schneider, Eileen Erdman, Dean Finelli, Lyn Jain, Seema Edwards, Kathryn M. Grijalva, Carlos G. Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title | Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title_full | Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title_fullStr | Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title_full_unstemmed | Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title_short | Respiratory Viral Detection in Children and Adults: Comparing Asymptomatic Controls and Patients With Community-Acquired Pneumonia |
title_sort | respiratory viral detection in children and adults: comparing asymptomatic controls and patients with community-acquired pneumonia |
topic | Major Articles and Brief Reports |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4721902/ https://www.ncbi.nlm.nih.gov/pubmed/26180044 http://dx.doi.org/10.1093/infdis/jiv323 |
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