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DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates

BACKGROUND: Parasite lactate dehydrogenase (pLDH) is extensively employed as malaria rapid diagnostic tests (RDTs). Moreover, it is a well-known drug target candidate. However, the genetic diversity of this gene might influence performance of RDT kits and its drug target candidacy. This study aimed...

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Autores principales: GETACHER FELEKE, Daniel, NATEGHPOUR, Mehdi, MOTEVALLI HAGHI, Afsaneh, HAJJARAN, Homa, FARIVAR, Leila, MOHEBALI, Mehdi, RAOOFIAN, Reza
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Tehran University of Medical Sciences 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724825/
https://www.ncbi.nlm.nih.gov/pubmed/26811715
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author GETACHER FELEKE, Daniel
NATEGHPOUR, Mehdi
MOTEVALLI HAGHI, Afsaneh
HAJJARAN, Homa
FARIVAR, Leila
MOHEBALI, Mehdi
RAOOFIAN, Reza
author_facet GETACHER FELEKE, Daniel
NATEGHPOUR, Mehdi
MOTEVALLI HAGHI, Afsaneh
HAJJARAN, Homa
FARIVAR, Leila
MOHEBALI, Mehdi
RAOOFIAN, Reza
author_sort GETACHER FELEKE, Daniel
collection PubMed
description BACKGROUND: Parasite lactate dehydrogenase (pLDH) is extensively employed as malaria rapid diagnostic tests (RDTs). Moreover, it is a well-known drug target candidate. However, the genetic diversity of this gene might influence performance of RDT kits and its drug target candidacy. This study aimed to determine polymorphism of pLDH gene from Iranian isolates of P. vivax and P. falciparum. METHODS: Genomic DNA was extracted from whole blood of microscopically confirmed P. vivax and P. falciparum infected patients. pLDH gene of P. falciparum and P. vivax was amplified using conventional PCR from 43 symptomatic malaria patients from Sistan and Baluchistan Province, Southeast Iran from 2012 to 2013. RESULTS: Sequence analysis of 15 P. vivax LDH showed fourteen had 100% identity with P. vivax Sal-1 and Belem strains. Two nucleotide substitutions were detected with only one resulted in amino acid change. Analysis of P. falciparum LDH sequences showed six of the seven sequences had 100% homology with P. falciparum 3D7 and Mzr-1. Moreover, PfLDH displayed three nucleotide changes that resulted in changing only one amino acid. PvLDH and PfLDH showed 75%–76% nucleotide and 90.4%–90.76% amino acid homology. CONCLUSION: pLDH gene from Iranian P. falciparum and P. vivax isolates displayed 98.8–100% homology with 1–3 nucleotide substitutions. This indicated this gene was relatively conserved. Additional studies can be done weather this genetic variation can influence the performance of pLDH based RDTs or not.
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spelling pubmed-47248252016-01-25 DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates GETACHER FELEKE, Daniel NATEGHPOUR, Mehdi MOTEVALLI HAGHI, Afsaneh HAJJARAN, Homa FARIVAR, Leila MOHEBALI, Mehdi RAOOFIAN, Reza Iran J Parasitol Original Article BACKGROUND: Parasite lactate dehydrogenase (pLDH) is extensively employed as malaria rapid diagnostic tests (RDTs). Moreover, it is a well-known drug target candidate. However, the genetic diversity of this gene might influence performance of RDT kits and its drug target candidacy. This study aimed to determine polymorphism of pLDH gene from Iranian isolates of P. vivax and P. falciparum. METHODS: Genomic DNA was extracted from whole blood of microscopically confirmed P. vivax and P. falciparum infected patients. pLDH gene of P. falciparum and P. vivax was amplified using conventional PCR from 43 symptomatic malaria patients from Sistan and Baluchistan Province, Southeast Iran from 2012 to 2013. RESULTS: Sequence analysis of 15 P. vivax LDH showed fourteen had 100% identity with P. vivax Sal-1 and Belem strains. Two nucleotide substitutions were detected with only one resulted in amino acid change. Analysis of P. falciparum LDH sequences showed six of the seven sequences had 100% homology with P. falciparum 3D7 and Mzr-1. Moreover, PfLDH displayed three nucleotide changes that resulted in changing only one amino acid. PvLDH and PfLDH showed 75%–76% nucleotide and 90.4%–90.76% amino acid homology. CONCLUSION: pLDH gene from Iranian P. falciparum and P. vivax isolates displayed 98.8–100% homology with 1–3 nucleotide substitutions. This indicated this gene was relatively conserved. Additional studies can be done weather this genetic variation can influence the performance of pLDH based RDTs or not. Tehran University of Medical Sciences 2015 /pmc/articles/PMC4724825/ /pubmed/26811715 Text en Copyright© Iranian Society of Parasitology & Tehran University of Medical Sciences This work is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License which allows users to read, copy, distribute and make derivative works for non-commercial purposes from the material, as long as the author of the original work is cited properly.
spellingShingle Original Article
GETACHER FELEKE, Daniel
NATEGHPOUR, Mehdi
MOTEVALLI HAGHI, Afsaneh
HAJJARAN, Homa
FARIVAR, Leila
MOHEBALI, Mehdi
RAOOFIAN, Reza
DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title_full DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title_fullStr DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title_full_unstemmed DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title_short DNA Sequence Polymorphism of the Lactate Dehydrogenase Genefrom Iranian Plasmodium vivax and Plasmodium falciparum Isolates
title_sort dna sequence polymorphism of the lactate dehydrogenase genefrom iranian plasmodium vivax and plasmodium falciparum isolates
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4724825/
https://www.ncbi.nlm.nih.gov/pubmed/26811715
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