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Revisiting the concept of a symmetric index of agreement for continuous datasets
Quantifying how close two datasets are to each other is a common and necessary undertaking in scientific research. The Pearson product-moment correlation coefficient r is a widely used measure of the degree of linear dependence between two data series, but it gives no indication of how similar the v...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4725897/ https://www.ncbi.nlm.nih.gov/pubmed/26762810 http://dx.doi.org/10.1038/srep19401 |
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author | Duveiller, Gregory Fasbender, Dominique Meroni, Michele |
author_facet | Duveiller, Gregory Fasbender, Dominique Meroni, Michele |
author_sort | Duveiller, Gregory |
collection | PubMed |
description | Quantifying how close two datasets are to each other is a common and necessary undertaking in scientific research. The Pearson product-moment correlation coefficient r is a widely used measure of the degree of linear dependence between two data series, but it gives no indication of how similar the values of these series are in magnitude. Although a number of indexes have been proposed to compare a dataset with a reference, only few are available to compare two datasets of equivalent (or unknown) reliability. After a brief review and numerical tests of the metrics designed to accomplish this task, this paper shows how an index proposed by Mielke can, with a minor modification, satisfy a series of desired properties, namely to be adimensional, bounded, symmetric, easy to compute and directly interpretable with respect to r. We thus show that this index can be considered as a natural extension to r that downregulates the value of r according to the bias between analysed datasets. The paper also proposes an effective way to disentangle the systematic and the unsystematic contribution to this agreement based on eigen decompositions. The use and value of the index is also illustrated on synthetic and real datasets. |
format | Online Article Text |
id | pubmed-4725897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47258972016-01-28 Revisiting the concept of a symmetric index of agreement for continuous datasets Duveiller, Gregory Fasbender, Dominique Meroni, Michele Sci Rep Article Quantifying how close two datasets are to each other is a common and necessary undertaking in scientific research. The Pearson product-moment correlation coefficient r is a widely used measure of the degree of linear dependence between two data series, but it gives no indication of how similar the values of these series are in magnitude. Although a number of indexes have been proposed to compare a dataset with a reference, only few are available to compare two datasets of equivalent (or unknown) reliability. After a brief review and numerical tests of the metrics designed to accomplish this task, this paper shows how an index proposed by Mielke can, with a minor modification, satisfy a series of desired properties, namely to be adimensional, bounded, symmetric, easy to compute and directly interpretable with respect to r. We thus show that this index can be considered as a natural extension to r that downregulates the value of r according to the bias between analysed datasets. The paper also proposes an effective way to disentangle the systematic and the unsystematic contribution to this agreement based on eigen decompositions. The use and value of the index is also illustrated on synthetic and real datasets. Nature Publishing Group 2016-01-14 /pmc/articles/PMC4725897/ /pubmed/26762810 http://dx.doi.org/10.1038/srep19401 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Duveiller, Gregory Fasbender, Dominique Meroni, Michele Revisiting the concept of a symmetric index of agreement for continuous datasets |
title | Revisiting the concept of a symmetric index of agreement for continuous datasets |
title_full | Revisiting the concept of a symmetric index of agreement for continuous datasets |
title_fullStr | Revisiting the concept of a symmetric index of agreement for continuous datasets |
title_full_unstemmed | Revisiting the concept of a symmetric index of agreement for continuous datasets |
title_short | Revisiting the concept of a symmetric index of agreement for continuous datasets |
title_sort | revisiting the concept of a symmetric index of agreement for continuous datasets |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4725897/ https://www.ncbi.nlm.nih.gov/pubmed/26762810 http://dx.doi.org/10.1038/srep19401 |
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