Cargando…

detectMITE: A novel approach to detect miniature inverted repeat transposable elements in genomes

Miniature inverted repeat transposable elements (MITEs) are prevalent in eukaryotic genomes, including plants and animals. Classified as a type of non-autonomous DNA transposable elements, they play important roles in genome organization and evolution. Comprehensive and accurate genome-wide detectio...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ye, Congting, Ji, Guoli, Liang, Chun
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Nature Publishing Group 2016
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4726161/ https://www.ncbi.nlm.nih.gov/pubmed/26795595 http://dx.doi.org/10.1038/srep19688

Ejemplares similares

Genome-Wide Comparative Analysis of Miniature Inverted Repeat Transposable Elements in 19 Arabidopsis thaliana Ecotype Accessions
por: Guo, Cheng, et al.
Publicado: (2017)

MITE Tracker: an accurate approach to identify miniature inverted-repeat transposable elements in large genomes
por: Crescente, Juan Manuel, et al.
Publicado: (2018)

P-MITE: a database for plant miniature inverted-repeat transposable elements
por: Chen, Jiongjiong, et al.
Publicado: (2014)

MUSTv2: An Improved De Novo Detection Program for Recently Active Miniature Inverted Repeat Transposable Elements (MITEs)
por: Ge, Ruiquan, et al.
Publicado: (2017)

Multigenome analysis implicates miniature inverted-repeat transposable elements (MITEs) in metabolic diversification in eudicots
por: Boutanaev, Alexander M., et al.
Publicado: (2018)

MITE-Hunter: a program for discovering miniature inverted-repeat transposable elements from genomic sequences
por: Han, Yujun, et al.
Publicado: (2010)

MITE Digger, an efficient and accurate algorithm for genome wide discovery of miniature inverted repeat transposable elements
por: Yang, Guojun
Publicado: (2013)

Miniature Inverted-Repeat Transposable Elements (MITEs) in the Two Lepidopteran Genomes of Helicoverpa armigera and Helicoverpa zea
por: Klai, Khouloud, et al.
Publicado: (2022)

Identification and Characterisation of five novel Miniature Inverted-repeat Transposable Elements (MITEs) in amphioxus (Branchiostoma floridae)
por: Osborne, PW., et al.
Publicado: (2006)

Characterization of active miniature inverted-repeat transposable elements in the peanut genome
por: Shirasawa, Kenta, et al.
Publicado: (2012)

Unexpected invasion of miniature inverted-repeat transposable elements in viral genomes
por: Zhang, Hua-Hao, et al.
Publicado: (2018)

detectIR: A Novel Program for Detecting Perfect and Imperfect Inverted Repeats Using Complex Numbers and Vector Calculation
por: Ye, Congting, et al.
Publicado: (2014)

Plant Lineage-Specific Amplification of Transcription Factor Binding Motifs by Miniature Inverted-Repeat Transposable Elements (MITEs)
por: Morata, Jordi, et al.
Publicado: (2018)

MiteFinderII: a novel tool to identify miniature inverted-repeat transposable elements hidden in eukaryotic genomes
por: Hu, Jialu, et al.
Publicado: (2018)

Comparative analysis of miniature inverted–repeat transposable elements (MITEs) and long terminal repeat (LTR) retrotransposons in six Citrus species
por: Liu, Yan, et al.
Publicado: (2019)

A Global Landscape of Miniature Inverted-Repeat Transposable Elements in the Carrot Genome
por: Macko-Podgórni, Alicja, et al.
Publicado: (2021)

Identification of novel MITEs (miniature inverted-repeat transposable elements) in Coxiella burnetii: implications for protein and small RNA evolution
por: Wachter, Shaun, et al.
Publicado: (2018)

Identification and characterization of a minisatellite contained within a novel miniature inverted-repeat transposable element (MITE) of Porphyromonas gingivalis
por: Klein, Brian A., et al.
Publicado: (2015)

Identification of an active miniature inverted‐repeat transposable element mJing in rice
por: Tang, Yanyan, et al.
Publicado: (2019)

iMITEdb: the genome-wide landscape of miniature inverted-repeat transposable elements in insects
por: Han, Min-Jin, et al.
Publicado: (2016)

Recent amplification of microsatellite-associated miniature inverted-repeat transposable elements in the pineapple genome
por: Lin, Lianyu, et al.
Publicado: (2021)

A miniature inverted-repeat transposable element, AddIn-MITE, located inside a WD40 gene is conserved in Andropogoneae grasses
por: Grativol, Clicia, et al.
Publicado: (2019)

Abundant Degenerate Miniature Inverted-Repeat Transposable Elements in Genomes of Epichloid Fungal Endophytes of Grasses
por: Fleetwood, Damien J., et al.
Publicado: (2011)

Translational repression by a miniature inverted-repeat transposable element in the 3′ untranslated region
por: Shen, Jianqiang, et al.
Publicado: (2017)

Miniature Inverted-repeat Transposable Elements Drive Rapid MicroRNA Diversification in Angiosperms
por: Guo, Zhonglong, et al.
Publicado: (2022)

A Family of Human MicroRNA Genes from Miniature Inverted-Repeat Transposable Elements
por: Piriyapongsa, Jittima, et al.
Publicado: (2007)

The Origin and Evolution of Six Miniature Inverted-Repeat Transposable Elements in Bombyx mori and Rhodnius prolixus
por: Zhang, Hua-Hao, et al.
Publicado: (2013)

Temporal changes in transcripts of miniature inverted‐repeat transposable elements during rice endosperm development
por: Nagata, Hiroki, et al.
Publicado: (2022)

Miniature inverted-repeat transposable elements (MITEs) in rice were originated and amplified predominantly after the divergence of Oryza and Brachypodium and contributed considerable diversity to the species
por: Chen, Jiongjiong, et al.
Publicado: (2012)

A Gaijin-like miniature inverted repeat transposable element is mobilized in rice during cell differentiation
por: Dong, Hai-Tao, et al.
Publicado: (2012)

Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea
por: Sampath, Perumal, et al.
Publicado: (2014)

Genome-wide analyses of miniature inverted-repeat transposable elements reveals new insights into the evolution of the Triticum-Aegilops group
por: Keidar-Friedman, Danielle, et al.
Publicado: (2018)

Stowaway miniature inverted repeat transposable elements are important agents driving recent genomic diversity in wild and cultivated carrot
por: Macko-Podgórni, Alicja, et al.
Publicado: (2019)

The Complex Genetic Context of bla (PER-1) Flanked by Miniature Inverted-Repeat Transposable Elements in Acinetobacter johnsonii
por: Zong, Zhiyong
Publicado: (2014)

Miniature Inverted-Repeat Transposable Elements: Small DNA Transposons That Have Contributed to Plant MICRORNA Gene Evolution
por: Pegler, Joseph L., et al.
Publicado: (2023)

Miniature Inverted–Repeat Transposable Elements (MITEs) Have Been Accumulated through Amplification Bursts and Play Important Roles in Gene Expression and Species Diversity in Oryza sativa
por: Lu, Chen, et al.
Publicado: (2012)

MITE(Aba12), a Novel Mobile Miniature Inverted-Repeat Transposable Element Identified in Acinetobacter baumannii ATCC 17978 and Its Prevalence across the Moraxellaceae Family
por: Adams, Felise G., et al.
Publicado: (2019)

Correction: Genome-Wide Comparative Analysis of 20 Miniature Inverted-Repeat Transposable Element Families in Brassica rapa and B. oleracea
Publicado: (2014)

Amplification of miniature inverted-repeat transposable elements and the associated impact on gene regulation and alternative splicing in mulberry (Morus notabilis)
por: Xin, Youchao, et al.
Publicado: (2019)

Genome-wide identification and development of miniature inverted-repeat transposable elements and intron length polymorphic markers in tea plant (Camellia sinensis)
por: Rohilla, Megha, et al.
Publicado: (2022)

Cannot write session to /tmp/vufind_sessions/sess_b96rrhrrf13jhhr7srsu56mkkt