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The prediction accuracy of dynamic mixed-effects models in clustered data

BACKGROUND: Clinical prediction models often fail to generalize in the context of clustered data, because most models fail to account for heterogeneity in outcome values and covariate effects across clusters. Furthermore, standard approaches for modeling clustered data, including generalized linear...

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Detalles Bibliográficos
Autores principales: Finkelman, Brian S., French, Benjamin, Kimmel, Stephen E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728760/
https://www.ncbi.nlm.nih.gov/pubmed/26819631
http://dx.doi.org/10.1186/s13040-016-0084-6
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author Finkelman, Brian S.
French, Benjamin
Kimmel, Stephen E.
author_facet Finkelman, Brian S.
French, Benjamin
Kimmel, Stephen E.
author_sort Finkelman, Brian S.
collection PubMed
description BACKGROUND: Clinical prediction models often fail to generalize in the context of clustered data, because most models fail to account for heterogeneity in outcome values and covariate effects across clusters. Furthermore, standard approaches for modeling clustered data, including generalized linear mixed-effects models, would not be expected to provide accurate predictions in novel clusters, because such predictions are typically based on the hypothetical mean cluster. We hypothesized that dynamic mixed-effects models, which incorporate data from previous predictions to refine the model for future predictions, would allow for cluster-specific predictions in novel clusters as the model is updated over time, thus improving overall model generalizability. RESULTS: We quantified the potential gains in prediction accuracy from using a dynamic modeling strategy in a simulation study. Furthermore, because clinical prediction models in the context of clustered data often involve outcomes that are dependent on patient volume, we examined whether using dynamic mixed-effects models would be robust to misspecification of the volume-outcome relationship. Our results indicated that dynamic mixed-effects models led to substantial improvements in prediction accuracy in clustered populations over a broad range of conditions, and were uniformly superior to static models. In addition, dynamic mixed-effects models were particularly robust to misspecification of the volume-outcome relationship and to variation in the frequency of model updating. The extent of the improvement in prediction accuracy that was observed with dynamic mixed-effects models depended on the relative impact of fixed and random effects on the outcome as well as the degree of misspecification of model fixed effects. CONCLUSIONS: Dynamic mixed-effects models led to substantial improvements in prediction model accuracy across a broad range of simulated conditions. Therefore, dynamic mixed-effects models could be a useful alternative to standard static models for improving the generalizability of clinical prediction models in the setting of clustered data, and, thus, well worth the logistical challenges that may accompany their implementation in practice. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13040-016-0084-6) contains supplementary material, which is available to authorized users.
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spelling pubmed-47287602016-01-27 The prediction accuracy of dynamic mixed-effects models in clustered data Finkelman, Brian S. French, Benjamin Kimmel, Stephen E. BioData Min Research BACKGROUND: Clinical prediction models often fail to generalize in the context of clustered data, because most models fail to account for heterogeneity in outcome values and covariate effects across clusters. Furthermore, standard approaches for modeling clustered data, including generalized linear mixed-effects models, would not be expected to provide accurate predictions in novel clusters, because such predictions are typically based on the hypothetical mean cluster. We hypothesized that dynamic mixed-effects models, which incorporate data from previous predictions to refine the model for future predictions, would allow for cluster-specific predictions in novel clusters as the model is updated over time, thus improving overall model generalizability. RESULTS: We quantified the potential gains in prediction accuracy from using a dynamic modeling strategy in a simulation study. Furthermore, because clinical prediction models in the context of clustered data often involve outcomes that are dependent on patient volume, we examined whether using dynamic mixed-effects models would be robust to misspecification of the volume-outcome relationship. Our results indicated that dynamic mixed-effects models led to substantial improvements in prediction accuracy in clustered populations over a broad range of conditions, and were uniformly superior to static models. In addition, dynamic mixed-effects models were particularly robust to misspecification of the volume-outcome relationship and to variation in the frequency of model updating. The extent of the improvement in prediction accuracy that was observed with dynamic mixed-effects models depended on the relative impact of fixed and random effects on the outcome as well as the degree of misspecification of model fixed effects. CONCLUSIONS: Dynamic mixed-effects models led to substantial improvements in prediction model accuracy across a broad range of simulated conditions. Therefore, dynamic mixed-effects models could be a useful alternative to standard static models for improving the generalizability of clinical prediction models in the setting of clustered data, and, thus, well worth the logistical challenges that may accompany their implementation in practice. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13040-016-0084-6) contains supplementary material, which is available to authorized users. BioMed Central 2016-01-27 /pmc/articles/PMC4728760/ /pubmed/26819631 http://dx.doi.org/10.1186/s13040-016-0084-6 Text en © Finkelman et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research
Finkelman, Brian S.
French, Benjamin
Kimmel, Stephen E.
The prediction accuracy of dynamic mixed-effects models in clustered data
title The prediction accuracy of dynamic mixed-effects models in clustered data
title_full The prediction accuracy of dynamic mixed-effects models in clustered data
title_fullStr The prediction accuracy of dynamic mixed-effects models in clustered data
title_full_unstemmed The prediction accuracy of dynamic mixed-effects models in clustered data
title_short The prediction accuracy of dynamic mixed-effects models in clustered data
title_sort prediction accuracy of dynamic mixed-effects models in clustered data
topic Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728760/
https://www.ncbi.nlm.nih.gov/pubmed/26819631
http://dx.doi.org/10.1186/s13040-016-0084-6
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