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Draft genome sequence of Paenibacillus sp. strain A2

Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main re...

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Autores principales: Zheng, Beiwen, Zhang, Fan, Dong, Hao, Chai, Lujun, Shu, Fuchang, Yi, Shaojin, Wang, Zhengliang, Cui, Qingfeng, Dong, Hanping, Zhang, Zhongzhi, Hou, Dujie, Yang, Jinshui, She, Yuehui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728784/
https://www.ncbi.nlm.nih.gov/pubmed/26819653
http://dx.doi.org/10.1186/s40793-015-0125-7
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author Zheng, Beiwen
Zhang, Fan
Dong, Hao
Chai, Lujun
Shu, Fuchang
Yi, Shaojin
Wang, Zhengliang
Cui, Qingfeng
Dong, Hanping
Zhang, Zhongzhi
Hou, Dujie
Yang, Jinshui
She, Yuehui
author_facet Zheng, Beiwen
Zhang, Fan
Dong, Hao
Chai, Lujun
Shu, Fuchang
Yi, Shaojin
Wang, Zhengliang
Cui, Qingfeng
Dong, Hanping
Zhang, Zhongzhi
Hou, Dujie
Yang, Jinshui
She, Yuehui
author_sort Zheng, Beiwen
collection PubMed
description Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main reasons for the interest in sequencing its genome. Here we describe the features of Paenibacillus sp. strain A2, together with the genome sequence and its annotation. The 7,650,246 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 54.2 % and contains 7575 protein-coding and 49 RNA genes, including 3 rRNA genes. One putative alkane monooxygenase, one putative alkanesulfonate monooxygenase, one putative alkanesulfonate transporter and four putative sulfate transporters were found in the draft genome.
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spelling pubmed-47287842016-01-27 Draft genome sequence of Paenibacillus sp. strain A2 Zheng, Beiwen Zhang, Fan Dong, Hao Chai, Lujun Shu, Fuchang Yi, Shaojin Wang, Zhengliang Cui, Qingfeng Dong, Hanping Zhang, Zhongzhi Hou, Dujie Yang, Jinshui She, Yuehui Stand Genomic Sci Short Genome Report Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main reasons for the interest in sequencing its genome. Here we describe the features of Paenibacillus sp. strain A2, together with the genome sequence and its annotation. The 7,650,246 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 54.2 % and contains 7575 protein-coding and 49 RNA genes, including 3 rRNA genes. One putative alkane monooxygenase, one putative alkanesulfonate monooxygenase, one putative alkanesulfonate transporter and four putative sulfate transporters were found in the draft genome. BioMed Central 2016-01-26 /pmc/articles/PMC4728784/ /pubmed/26819653 http://dx.doi.org/10.1186/s40793-015-0125-7 Text en © Zheng et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Short Genome Report
Zheng, Beiwen
Zhang, Fan
Dong, Hao
Chai, Lujun
Shu, Fuchang
Yi, Shaojin
Wang, Zhengliang
Cui, Qingfeng
Dong, Hanping
Zhang, Zhongzhi
Hou, Dujie
Yang, Jinshui
She, Yuehui
Draft genome sequence of Paenibacillus sp. strain A2
title Draft genome sequence of Paenibacillus sp. strain A2
title_full Draft genome sequence of Paenibacillus sp. strain A2
title_fullStr Draft genome sequence of Paenibacillus sp. strain A2
title_full_unstemmed Draft genome sequence of Paenibacillus sp. strain A2
title_short Draft genome sequence of Paenibacillus sp. strain A2
title_sort draft genome sequence of paenibacillus sp. strain a2
topic Short Genome Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728784/
https://www.ncbi.nlm.nih.gov/pubmed/26819653
http://dx.doi.org/10.1186/s40793-015-0125-7
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