Cargando…
Draft genome sequence of Paenibacillus sp. strain A2
Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main re...
Autores principales: | , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728784/ https://www.ncbi.nlm.nih.gov/pubmed/26819653 http://dx.doi.org/10.1186/s40793-015-0125-7 |
_version_ | 1782412178122342400 |
---|---|
author | Zheng, Beiwen Zhang, Fan Dong, Hao Chai, Lujun Shu, Fuchang Yi, Shaojin Wang, Zhengliang Cui, Qingfeng Dong, Hanping Zhang, Zhongzhi Hou, Dujie Yang, Jinshui She, Yuehui |
author_facet | Zheng, Beiwen Zhang, Fan Dong, Hao Chai, Lujun Shu, Fuchang Yi, Shaojin Wang, Zhengliang Cui, Qingfeng Dong, Hanping Zhang, Zhongzhi Hou, Dujie Yang, Jinshui She, Yuehui |
author_sort | Zheng, Beiwen |
collection | PubMed |
description | Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main reasons for the interest in sequencing its genome. Here we describe the features of Paenibacillus sp. strain A2, together with the genome sequence and its annotation. The 7,650,246 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 54.2 % and contains 7575 protein-coding and 49 RNA genes, including 3 rRNA genes. One putative alkane monooxygenase, one putative alkanesulfonate monooxygenase, one putative alkanesulfonate transporter and four putative sulfate transporters were found in the draft genome. |
format | Online Article Text |
id | pubmed-4728784 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-47287842016-01-27 Draft genome sequence of Paenibacillus sp. strain A2 Zheng, Beiwen Zhang, Fan Dong, Hao Chai, Lujun Shu, Fuchang Yi, Shaojin Wang, Zhengliang Cui, Qingfeng Dong, Hanping Zhang, Zhongzhi Hou, Dujie Yang, Jinshui She, Yuehui Stand Genomic Sci Short Genome Report Paenibacillus sp. strain A2 is a Gram-negative rod-shaped bacterium isolated from a mixture of formation water and petroleum in Daqing oilfield, China. This facultative aerobic bacterium was found to have a broad capacity for metabolizing hydrocarbon and organosulfur compounds, which are the main reasons for the interest in sequencing its genome. Here we describe the features of Paenibacillus sp. strain A2, together with the genome sequence and its annotation. The 7,650,246 bp long genome (1 chromosome but no plasmid) exhibits a G+C content of 54.2 % and contains 7575 protein-coding and 49 RNA genes, including 3 rRNA genes. One putative alkane monooxygenase, one putative alkanesulfonate monooxygenase, one putative alkanesulfonate transporter and four putative sulfate transporters were found in the draft genome. BioMed Central 2016-01-26 /pmc/articles/PMC4728784/ /pubmed/26819653 http://dx.doi.org/10.1186/s40793-015-0125-7 Text en © Zheng et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Short Genome Report Zheng, Beiwen Zhang, Fan Dong, Hao Chai, Lujun Shu, Fuchang Yi, Shaojin Wang, Zhengliang Cui, Qingfeng Dong, Hanping Zhang, Zhongzhi Hou, Dujie Yang, Jinshui She, Yuehui Draft genome sequence of Paenibacillus sp. strain A2 |
title | Draft genome sequence of Paenibacillus sp. strain A2 |
title_full | Draft genome sequence of Paenibacillus sp. strain A2 |
title_fullStr | Draft genome sequence of Paenibacillus sp. strain A2 |
title_full_unstemmed | Draft genome sequence of Paenibacillus sp. strain A2 |
title_short | Draft genome sequence of Paenibacillus sp. strain A2 |
title_sort | draft genome sequence of paenibacillus sp. strain a2 |
topic | Short Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4728784/ https://www.ncbi.nlm.nih.gov/pubmed/26819653 http://dx.doi.org/10.1186/s40793-015-0125-7 |
work_keys_str_mv | AT zhengbeiwen draftgenomesequenceofpaenibacillusspstraina2 AT zhangfan draftgenomesequenceofpaenibacillusspstraina2 AT donghao draftgenomesequenceofpaenibacillusspstraina2 AT chailujun draftgenomesequenceofpaenibacillusspstraina2 AT shufuchang draftgenomesequenceofpaenibacillusspstraina2 AT yishaojin draftgenomesequenceofpaenibacillusspstraina2 AT wangzhengliang draftgenomesequenceofpaenibacillusspstraina2 AT cuiqingfeng draftgenomesequenceofpaenibacillusspstraina2 AT donghanping draftgenomesequenceofpaenibacillusspstraina2 AT zhangzhongzhi draftgenomesequenceofpaenibacillusspstraina2 AT houdujie draftgenomesequenceofpaenibacillusspstraina2 AT yangjinshui draftgenomesequenceofpaenibacillusspstraina2 AT sheyuehui draftgenomesequenceofpaenibacillusspstraina2 |