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Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae
Monochamus alternatus Hope is the main vector in China of the Pine Wilt Disease caused by the pine wood nematode Bursaphelenchus xylophilus. Although chemical control is traditionally used to prevent pine wilt disease, new strategies based in biological control are promising ways for the management...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729689/ https://www.ncbi.nlm.nih.gov/pubmed/26815657 http://dx.doi.org/10.1371/journal.pone.0147855 |
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author | Wu, Songqing Zhu, Xiaoli Liu, Zhaoxia Shao, Ensi Rebeca, Carballar-Lejarazú Guo, Yajie Xiong, Yueting Mou, Yani Xu, Runxue Hu, Xia Liang, Guanghong Zou, Shuangquan Guan, Xiong Zhang, Feiping |
author_facet | Wu, Songqing Zhu, Xiaoli Liu, Zhaoxia Shao, Ensi Rebeca, Carballar-Lejarazú Guo, Yajie Xiong, Yueting Mou, Yani Xu, Runxue Hu, Xia Liang, Guanghong Zou, Shuangquan Guan, Xiong Zhang, Feiping |
author_sort | Wu, Songqing |
collection | PubMed |
description | Monochamus alternatus Hope is the main vector in China of the Pine Wilt Disease caused by the pine wood nematode Bursaphelenchus xylophilus. Although chemical control is traditionally used to prevent pine wilt disease, new strategies based in biological control are promising ways for the management of the disease. However, there is no deep sequence analysis of Monochamus alternatus Hope that describes the transcriptome and no information is available about gene function of this insect vector. We used next generation sequencing technology to sequence the whole fourth instar larva transcriptome of Monochamus alternatus Hope and successfully built a Monochamus alternatus Hope transcriptome database. In total, 105,612 unigenes were assigned for Gene Ontology (GO) terms, information for 16,730 classified unigenes was obtained in the Clusters of Orthologous Groups (COGs) database, and 13,024 unigenes matched with 224 predicted pathways in the Kyoto Encyclopedia of Genes and Genome (KEGG). In addition, genes related to putative insecticide resistance-related genes, RNAi, the Bt receptor, intestinal digestive enzymes, possible future insect control targets and immune-related molecules are described. This study provides valuable basic information that can be used as a gateway to develop new molecular tools for Monochamus alternatus Hope control strategies. |
format | Online Article Text |
id | pubmed-4729689 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47296892016-02-04 Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae Wu, Songqing Zhu, Xiaoli Liu, Zhaoxia Shao, Ensi Rebeca, Carballar-Lejarazú Guo, Yajie Xiong, Yueting Mou, Yani Xu, Runxue Hu, Xia Liang, Guanghong Zou, Shuangquan Guan, Xiong Zhang, Feiping PLoS One Research Article Monochamus alternatus Hope is the main vector in China of the Pine Wilt Disease caused by the pine wood nematode Bursaphelenchus xylophilus. Although chemical control is traditionally used to prevent pine wilt disease, new strategies based in biological control are promising ways for the management of the disease. However, there is no deep sequence analysis of Monochamus alternatus Hope that describes the transcriptome and no information is available about gene function of this insect vector. We used next generation sequencing technology to sequence the whole fourth instar larva transcriptome of Monochamus alternatus Hope and successfully built a Monochamus alternatus Hope transcriptome database. In total, 105,612 unigenes were assigned for Gene Ontology (GO) terms, information for 16,730 classified unigenes was obtained in the Clusters of Orthologous Groups (COGs) database, and 13,024 unigenes matched with 224 predicted pathways in the Kyoto Encyclopedia of Genes and Genome (KEGG). In addition, genes related to putative insecticide resistance-related genes, RNAi, the Bt receptor, intestinal digestive enzymes, possible future insect control targets and immune-related molecules are described. This study provides valuable basic information that can be used as a gateway to develop new molecular tools for Monochamus alternatus Hope control strategies. Public Library of Science 2016-01-27 /pmc/articles/PMC4729689/ /pubmed/26815657 http://dx.doi.org/10.1371/journal.pone.0147855 Text en © 2016 Wu et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Wu, Songqing Zhu, Xiaoli Liu, Zhaoxia Shao, Ensi Rebeca, Carballar-Lejarazú Guo, Yajie Xiong, Yueting Mou, Yani Xu, Runxue Hu, Xia Liang, Guanghong Zou, Shuangquan Guan, Xiong Zhang, Feiping Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title | Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title_full | Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title_fullStr | Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title_full_unstemmed | Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title_short | Identification of Genes Relevant to Pesticides and Biology from Global Transcriptome Data of Monochamus alternatus Hope (Coleoptera: Cerambycidae) Larvae |
title_sort | identification of genes relevant to pesticides and biology from global transcriptome data of monochamus alternatus hope (coleoptera: cerambycidae) larvae |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729689/ https://www.ncbi.nlm.nih.gov/pubmed/26815657 http://dx.doi.org/10.1371/journal.pone.0147855 |
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