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Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma
Survival following a diagnosis of multiple myeloma (MM) varies between patients and some of these differences may be a consequence of inherited genetic variation. In this study, to identify genetic markers associated with MM overall survival (MM-OS), we conduct a meta-analysis of four patient series...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729868/ https://www.ncbi.nlm.nih.gov/pubmed/26743840 http://dx.doi.org/10.1038/ncomms10290 |
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author | Johnson, David C. Weinhold, Niels Mitchell, Jonathan S. Chen, Bowang Kaiser, Martin Begum, Dil B. Hillengass, Jens Bertsch, Uta Gregory, Walter A. Cairns, David Jackson, Graham H. Försti, Asta Nickel, Jolanta Hoffmann, Per Nöethen, Markus M. Stephens, Owen W. Barlogie, Bart Davis, Faith E. Hemminki, Kari Goldschmidt, Hartmut Houlston, Richard S. Morgan, Gareth J. |
author_facet | Johnson, David C. Weinhold, Niels Mitchell, Jonathan S. Chen, Bowang Kaiser, Martin Begum, Dil B. Hillengass, Jens Bertsch, Uta Gregory, Walter A. Cairns, David Jackson, Graham H. Försti, Asta Nickel, Jolanta Hoffmann, Per Nöethen, Markus M. Stephens, Owen W. Barlogie, Bart Davis, Faith E. Hemminki, Kari Goldschmidt, Hartmut Houlston, Richard S. Morgan, Gareth J. |
author_sort | Johnson, David C. |
collection | PubMed |
description | Survival following a diagnosis of multiple myeloma (MM) varies between patients and some of these differences may be a consequence of inherited genetic variation. In this study, to identify genetic markers associated with MM overall survival (MM-OS), we conduct a meta-analysis of four patient series of European ancestry, totalling 3,256 patients with 1,200 MM-associated deaths. Each series is genotyped for ∼600,000 single nucleotide polymorphisms across the genome; genotypes for six million common variants are imputed using 1000 Genomes Project and UK10K as the reference. The association between genotype and OS is assessed by Cox proportional hazards model adjusting for age, sex, International staging system and treatment. We identify a locus at 6q25.1 marked by rs12374648 associated with MM-OS (hazard ratio=1.34, 95% confidence interval=1.22–1.48, P=4.69 × 10(–9)). Our findings have potential clinical implications since they demonstrate that inherited genotypes can provide prognostic information in addition to conventional tumor acquired prognostic factors. |
format | Online Article Text |
id | pubmed-4729868 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47298682016-03-04 Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma Johnson, David C. Weinhold, Niels Mitchell, Jonathan S. Chen, Bowang Kaiser, Martin Begum, Dil B. Hillengass, Jens Bertsch, Uta Gregory, Walter A. Cairns, David Jackson, Graham H. Försti, Asta Nickel, Jolanta Hoffmann, Per Nöethen, Markus M. Stephens, Owen W. Barlogie, Bart Davis, Faith E. Hemminki, Kari Goldschmidt, Hartmut Houlston, Richard S. Morgan, Gareth J. Nat Commun Article Survival following a diagnosis of multiple myeloma (MM) varies between patients and some of these differences may be a consequence of inherited genetic variation. In this study, to identify genetic markers associated with MM overall survival (MM-OS), we conduct a meta-analysis of four patient series of European ancestry, totalling 3,256 patients with 1,200 MM-associated deaths. Each series is genotyped for ∼600,000 single nucleotide polymorphisms across the genome; genotypes for six million common variants are imputed using 1000 Genomes Project and UK10K as the reference. The association between genotype and OS is assessed by Cox proportional hazards model adjusting for age, sex, International staging system and treatment. We identify a locus at 6q25.1 marked by rs12374648 associated with MM-OS (hazard ratio=1.34, 95% confidence interval=1.22–1.48, P=4.69 × 10(–9)). Our findings have potential clinical implications since they demonstrate that inherited genotypes can provide prognostic information in addition to conventional tumor acquired prognostic factors. Nature Publishing Group 2016-01-08 /pmc/articles/PMC4729868/ /pubmed/26743840 http://dx.doi.org/10.1038/ncomms10290 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Johnson, David C. Weinhold, Niels Mitchell, Jonathan S. Chen, Bowang Kaiser, Martin Begum, Dil B. Hillengass, Jens Bertsch, Uta Gregory, Walter A. Cairns, David Jackson, Graham H. Försti, Asta Nickel, Jolanta Hoffmann, Per Nöethen, Markus M. Stephens, Owen W. Barlogie, Bart Davis, Faith E. Hemminki, Kari Goldschmidt, Hartmut Houlston, Richard S. Morgan, Gareth J. Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title | Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title_full | Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title_fullStr | Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title_full_unstemmed | Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title_short | Genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
title_sort | genome-wide association study identifies variation at 6q25.1 associated with survival in multiple myeloma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4729868/ https://www.ncbi.nlm.nih.gov/pubmed/26743840 http://dx.doi.org/10.1038/ncomms10290 |
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