Cargando…

The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)

Karyotype evolution in Carnivora is thoroughly studied by classical and molecular cytogenetics and supplemented by reconstructions of Ancestral Carnivora Karyotype (ACK). However chromosome painting information from two pinniped families (Odobenidae and Otariidae) is noticeably missing. We report on...

Descripción completa

Detalles Bibliográficos
Autores principales: Beklemisheva, Violetta R., Perelman, Polina L., Lemskaya, Natalya A., Kulemzina, Anastasia I., Proskuryakova, Anastasia A., Burkanov, Vladimir N., Graphodatsky, Alexander S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4731086/
https://www.ncbi.nlm.nih.gov/pubmed/26821159
http://dx.doi.org/10.1371/journal.pone.0147647
_version_ 1782412513702313984
author Beklemisheva, Violetta R.
Perelman, Polina L.
Lemskaya, Natalya A.
Kulemzina, Anastasia I.
Proskuryakova, Anastasia A.
Burkanov, Vladimir N.
Graphodatsky, Alexander S.
author_facet Beklemisheva, Violetta R.
Perelman, Polina L.
Lemskaya, Natalya A.
Kulemzina, Anastasia I.
Proskuryakova, Anastasia A.
Burkanov, Vladimir N.
Graphodatsky, Alexander S.
author_sort Beklemisheva, Violetta R.
collection PubMed
description Karyotype evolution in Carnivora is thoroughly studied by classical and molecular cytogenetics and supplemented by reconstructions of Ancestral Carnivora Karyotype (ACK). However chromosome painting information from two pinniped families (Odobenidae and Otariidae) is noticeably missing. We report on the construction of the comparative chromosome map for species from each of the three pinniped families: the walrus (Odobenus rosmarus, Odobenidae–monotypic family), near threatened Steller sea lion (Eumetopias jubatus, Otariidae) and the endemic Baikal seal (Pusa sibirica, Phocidae) using combination of human, domestic dog and stone marten whole-chromosome painting probes. The earliest karyological studies of Pinnipedia showed that pinnipeds were characterized by a pronounced karyological conservatism that is confirmed here with species from Phocidae, Otariidae and Odobenidae sharing same low number of conserved human autosomal segments (32). Chromosome painting in Pinnipedia and comparison with non-pinniped carnivore karyotypes provide strong support for refined structure of ACK with 2n = 38. Constructed comparative chromosome maps show that pinniped karyotype evolution was characterized by few tandem fusions, seemingly absent inversions and slow rate of genome rearrangements (less then one rearrangement per 10 million years). Integrative comparative analyses with published chromosome painting of Phoca vitulina revealed common cytogenetic signature for Phoca/Pusa branch and supports Phocidae and Otaroidea (Otariidae/Odobenidae) as sister groups. We revealed rearrangements specific for walrus karyotype and found the chromosomal signature linking together families Otariidae and Odobenidae. The Steller sea lion karyotype is the most conserved among three studied species and differs from the ACK by single fusion. The study underlined the strikingly slow karyotype evolution of the Pinnipedia in general and the Otariidae in particular.
format Online
Article
Text
id pubmed-4731086
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-47310862016-02-04 The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora) Beklemisheva, Violetta R. Perelman, Polina L. Lemskaya, Natalya A. Kulemzina, Anastasia I. Proskuryakova, Anastasia A. Burkanov, Vladimir N. Graphodatsky, Alexander S. PLoS One Research Article Karyotype evolution in Carnivora is thoroughly studied by classical and molecular cytogenetics and supplemented by reconstructions of Ancestral Carnivora Karyotype (ACK). However chromosome painting information from two pinniped families (Odobenidae and Otariidae) is noticeably missing. We report on the construction of the comparative chromosome map for species from each of the three pinniped families: the walrus (Odobenus rosmarus, Odobenidae–monotypic family), near threatened Steller sea lion (Eumetopias jubatus, Otariidae) and the endemic Baikal seal (Pusa sibirica, Phocidae) using combination of human, domestic dog and stone marten whole-chromosome painting probes. The earliest karyological studies of Pinnipedia showed that pinnipeds were characterized by a pronounced karyological conservatism that is confirmed here with species from Phocidae, Otariidae and Odobenidae sharing same low number of conserved human autosomal segments (32). Chromosome painting in Pinnipedia and comparison with non-pinniped carnivore karyotypes provide strong support for refined structure of ACK with 2n = 38. Constructed comparative chromosome maps show that pinniped karyotype evolution was characterized by few tandem fusions, seemingly absent inversions and slow rate of genome rearrangements (less then one rearrangement per 10 million years). Integrative comparative analyses with published chromosome painting of Phoca vitulina revealed common cytogenetic signature for Phoca/Pusa branch and supports Phocidae and Otaroidea (Otariidae/Odobenidae) as sister groups. We revealed rearrangements specific for walrus karyotype and found the chromosomal signature linking together families Otariidae and Odobenidae. The Steller sea lion karyotype is the most conserved among three studied species and differs from the ACK by single fusion. The study underlined the strikingly slow karyotype evolution of the Pinnipedia in general and the Otariidae in particular. Public Library of Science 2016-01-28 /pmc/articles/PMC4731086/ /pubmed/26821159 http://dx.doi.org/10.1371/journal.pone.0147647 Text en https://creativecommons.org/publicdomain/zero/1.0/ This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 (https://creativecommons.org/publicdomain/zero/1.0/) public domain dedication.
spellingShingle Research Article
Beklemisheva, Violetta R.
Perelman, Polina L.
Lemskaya, Natalya A.
Kulemzina, Anastasia I.
Proskuryakova, Anastasia A.
Burkanov, Vladimir N.
Graphodatsky, Alexander S.
The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title_full The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title_fullStr The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title_full_unstemmed The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title_short The Ancestral Carnivore Karyotype As Substantiated by Comparative Chromosome Painting of Three Pinnipeds, the Walrus, the Steller Sea Lion and the Baikal Seal (Pinnipedia, Carnivora)
title_sort ancestral carnivore karyotype as substantiated by comparative chromosome painting of three pinnipeds, the walrus, the steller sea lion and the baikal seal (pinnipedia, carnivora)
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4731086/
https://www.ncbi.nlm.nih.gov/pubmed/26821159
http://dx.doi.org/10.1371/journal.pone.0147647
work_keys_str_mv AT beklemishevaviolettar theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT perelmanpolinal theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT lemskayanatalyaa theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT kulemzinaanastasiai theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT proskuryakovaanastasiaa theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT burkanovvladimirn theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT graphodatskyalexanders theancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT beklemishevaviolettar ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT perelmanpolinal ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT lemskayanatalyaa ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT kulemzinaanastasiai ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT proskuryakovaanastasiaa ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT burkanovvladimirn ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora
AT graphodatskyalexanders ancestralcarnivorekaryotypeassubstantiatedbycomparativechromosomepaintingofthreepinnipedsthewalrusthestellersealionandthebaikalsealpinnipediacarnivora