Cargando…
A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily co...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4735554/ https://www.ncbi.nlm.nih.gov/pubmed/26758424 http://dx.doi.org/10.1038/ncomms10368 |
_version_ | 1782413099727323136 |
---|---|
author | Vissers, Joseph H.A. Manning, Samuel A. Kulkarni, Aishwarya Harvey, Kieran F. |
author_facet | Vissers, Joseph H.A. Manning, Samuel A. Kulkarni, Aishwarya Harvey, Kieran F. |
author_sort | Vissers, Joseph H.A. |
collection | PubMed |
description | Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily conserved growth-regulatory network. Here we investigate an important technical limitation with the widely used VDRC KK RNAi collection. We find that approximately 25% of VDRC KK RNAi lines cause false-positive enhancement of the Hippo pathway, owing to ectopic expression of the Tiptop transcription factor. Of relevance to the broader Drosophila community, ectopic tiptop (tio) expression can also cause organ malformations and mask phenotypes such as organ overgrowth. To enhance the use of the VDRC KK RNAi library, we have generated a D. melanogaster strain that will allow researchers to test, in a single cross, whether their genetic screen of interest will be affected by ectopic tio expression. |
format | Online Article Text |
id | pubmed-4735554 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47355542016-03-04 A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth Vissers, Joseph H.A. Manning, Samuel A. Kulkarni, Aishwarya Harvey, Kieran F. Nat Commun Article Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily conserved growth-regulatory network. Here we investigate an important technical limitation with the widely used VDRC KK RNAi collection. We find that approximately 25% of VDRC KK RNAi lines cause false-positive enhancement of the Hippo pathway, owing to ectopic expression of the Tiptop transcription factor. Of relevance to the broader Drosophila community, ectopic tiptop (tio) expression can also cause organ malformations and mask phenotypes such as organ overgrowth. To enhance the use of the VDRC KK RNAi library, we have generated a D. melanogaster strain that will allow researchers to test, in a single cross, whether their genetic screen of interest will be affected by ectopic tio expression. Nature Publishing Group 2016-01-13 /pmc/articles/PMC4735554/ /pubmed/26758424 http://dx.doi.org/10.1038/ncomms10368 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Vissers, Joseph H.A. Manning, Samuel A. Kulkarni, Aishwarya Harvey, Kieran F. A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title | A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title_full | A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title_fullStr | A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title_full_unstemmed | A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title_short | A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth |
title_sort | drosophila rnai library modulates hippo pathway-dependent tissue growth |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4735554/ https://www.ncbi.nlm.nih.gov/pubmed/26758424 http://dx.doi.org/10.1038/ncomms10368 |
work_keys_str_mv | AT vissersjosephha adrosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT manningsamuela adrosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT kulkarniaishwarya adrosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT harveykieranf adrosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT vissersjosephha drosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT manningsamuela drosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT kulkarniaishwarya drosophilarnailibrarymodulateshippopathwaydependenttissuegrowth AT harveykieranf drosophilarnailibrarymodulateshippopathwaydependenttissuegrowth |