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A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth

Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily co...

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Autores principales: Vissers, Joseph H.A., Manning, Samuel A., Kulkarni, Aishwarya, Harvey, Kieran F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4735554/
https://www.ncbi.nlm.nih.gov/pubmed/26758424
http://dx.doi.org/10.1038/ncomms10368
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author Vissers, Joseph H.A.
Manning, Samuel A.
Kulkarni, Aishwarya
Harvey, Kieran F.
author_facet Vissers, Joseph H.A.
Manning, Samuel A.
Kulkarni, Aishwarya
Harvey, Kieran F.
author_sort Vissers, Joseph H.A.
collection PubMed
description Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily conserved growth-regulatory network. Here we investigate an important technical limitation with the widely used VDRC KK RNAi collection. We find that approximately 25% of VDRC KK RNAi lines cause false-positive enhancement of the Hippo pathway, owing to ectopic expression of the Tiptop transcription factor. Of relevance to the broader Drosophila community, ectopic tiptop (tio) expression can also cause organ malformations and mask phenotypes such as organ overgrowth. To enhance the use of the VDRC KK RNAi library, we have generated a D. melanogaster strain that will allow researchers to test, in a single cross, whether their genetic screen of interest will be affected by ectopic tio expression.
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spelling pubmed-47355542016-03-04 A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth Vissers, Joseph H.A. Manning, Samuel A. Kulkarni, Aishwarya Harvey, Kieran F. Nat Commun Article Libraries of transgenic Drosophila melanogaster carrying RNA interference (RNAi) constructs have been used extensively to perform large-scale functional genetic screens in vivo. For example, RNAi screens have facilitated the discovery of multiple components of the Hippo pathway, an evolutionarily conserved growth-regulatory network. Here we investigate an important technical limitation with the widely used VDRC KK RNAi collection. We find that approximately 25% of VDRC KK RNAi lines cause false-positive enhancement of the Hippo pathway, owing to ectopic expression of the Tiptop transcription factor. Of relevance to the broader Drosophila community, ectopic tiptop (tio) expression can also cause organ malformations and mask phenotypes such as organ overgrowth. To enhance the use of the VDRC KK RNAi library, we have generated a D. melanogaster strain that will allow researchers to test, in a single cross, whether their genetic screen of interest will be affected by ectopic tio expression. Nature Publishing Group 2016-01-13 /pmc/articles/PMC4735554/ /pubmed/26758424 http://dx.doi.org/10.1038/ncomms10368 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Vissers, Joseph H.A.
Manning, Samuel A.
Kulkarni, Aishwarya
Harvey, Kieran F.
A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title_full A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title_fullStr A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title_full_unstemmed A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title_short A Drosophila RNAi library modulates Hippo pathway-dependent tissue growth
title_sort drosophila rnai library modulates hippo pathway-dependent tissue growth
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4735554/
https://www.ncbi.nlm.nih.gov/pubmed/26758424
http://dx.doi.org/10.1038/ncomms10368
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