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Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy

Understanding the dynamics of interacting proteins is a crucial step toward describing many biophysical processes. Here we investigate the backbone dynamics for protein GB1 in two different assemblies: crystalline GB1 and the precipitated GB1–antibody complex with a molecular weight of more than 300...

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Autores principales: Lamley, Jonathan M., Öster, Carl, Stevens, Rebecca A., Lewandowski, Józef R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: WILEY‐VCH Verlag 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736466/
https://www.ncbi.nlm.nih.gov/pubmed/26537742
http://dx.doi.org/10.1002/anie.201509168
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author Lamley, Jonathan M.
Öster, Carl
Stevens, Rebecca A.
Lewandowski, Józef R.
author_facet Lamley, Jonathan M.
Öster, Carl
Stevens, Rebecca A.
Lewandowski, Józef R.
author_sort Lamley, Jonathan M.
collection PubMed
description Understanding the dynamics of interacting proteins is a crucial step toward describing many biophysical processes. Here we investigate the backbone dynamics for protein GB1 in two different assemblies: crystalline GB1 and the precipitated GB1–antibody complex with a molecular weight of more than 300 kDa. We perform these measurements on samples containing as little as eight nanomoles of GB1. From measurements of site‐specific (15)N relaxation rates including relaxation dispersion we obtain snapshots of dynamics spanning nine orders of magnitude in terms of the time scale. A comparison of measurements for GB1 in either environment reveals that while many of the dynamic features of the protein are conserved between them (in particular for the fast picosecond–nanosecond motions), much greater differences occur for slow motions with motions in the >500 ns range being more prevalent in the complex. The data suggest that GB1 can potentially undergo a small‐amplitude overall anisotropic motion sampling the interaction interface in the complex.
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spelling pubmed-47364662016-02-12 Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy Lamley, Jonathan M. Öster, Carl Stevens, Rebecca A. Lewandowski, Józef R. Angew Chem Int Ed Engl Communications Understanding the dynamics of interacting proteins is a crucial step toward describing many biophysical processes. Here we investigate the backbone dynamics for protein GB1 in two different assemblies: crystalline GB1 and the precipitated GB1–antibody complex with a molecular weight of more than 300 kDa. We perform these measurements on samples containing as little as eight nanomoles of GB1. From measurements of site‐specific (15)N relaxation rates including relaxation dispersion we obtain snapshots of dynamics spanning nine orders of magnitude in terms of the time scale. A comparison of measurements for GB1 in either environment reveals that while many of the dynamic features of the protein are conserved between them (in particular for the fast picosecond–nanosecond motions), much greater differences occur for slow motions with motions in the >500 ns range being more prevalent in the complex. The data suggest that GB1 can potentially undergo a small‐amplitude overall anisotropic motion sampling the interaction interface in the complex. WILEY‐VCH Verlag 2015-11-02 2015-12-14 /pmc/articles/PMC4736466/ /pubmed/26537742 http://dx.doi.org/10.1002/anie.201509168 Text en © 2015 The Authors. Published by Wiley‐VCH Verlag GmbH & Co. KGaA. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. Open access.
spellingShingle Communications
Lamley, Jonathan M.
Öster, Carl
Stevens, Rebecca A.
Lewandowski, Józef R.
Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title_full Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title_fullStr Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title_full_unstemmed Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title_short Intermolecular Interactions and Protein Dynamics by Solid‐State NMR Spectroscopy
title_sort intermolecular interactions and protein dynamics by solid‐state nmr spectroscopy
topic Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736466/
https://www.ncbi.nlm.nih.gov/pubmed/26537742
http://dx.doi.org/10.1002/anie.201509168
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