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Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females
We investigated three common polymorphisms (SNPs) in the XRCC3 gene (rs861539, rs1799794, and rs1799796) in 143 Saudi females suffering from breast cancer (median age = 51.4 years) and 145 age matched normal healthy controls. DNA was extracted from whole blood and genotyping was conducted using PCR-...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi Publishing Corporation
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736606/ https://www.ncbi.nlm.nih.gov/pubmed/26881229 http://dx.doi.org/10.1155/2016/8721052 |
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author | Ali, Alaa Mohammed AbdulKareem, Huda Al Anazi, Mohammad Reddy Parine, Narasimha Shaik, Jilani Purusottapatnam Alamri, Abdullah Ali Khan Pathan, Akbar Warsy, Arjumand |
author_facet | Ali, Alaa Mohammed AbdulKareem, Huda Al Anazi, Mohammad Reddy Parine, Narasimha Shaik, Jilani Purusottapatnam Alamri, Abdullah Ali Khan Pathan, Akbar Warsy, Arjumand |
author_sort | Ali, Alaa Mohammed |
collection | PubMed |
description | We investigated three common polymorphisms (SNPs) in the XRCC3 gene (rs861539, rs1799794, and rs1799796) in 143 Saudi females suffering from breast cancer (median age = 51.4 years) and 145 age matched normal healthy controls. DNA was extracted from whole blood and genotyping was conducted using PCR-RFLP. rs1799794 showed significant association, where AA and AA+AG occurred at a significantly higher frequency in the cancer patients compared to the control group (OR: 28.1; 95% CI: 3.76–21.12; χ (2): 22.82; p < 0.0001). The G allele was protective and presented with a dominant model. The genotype and allele frequencies of rs861539 C>T and rs1799796 A>G did not show a significant difference when the results in the patients and controls were compared. However, the frequency of rs1799796 differed significantly in patients with different age of diagnosis, tumor grade, and ER and HER2 status. The wild type A allele occurred at a higher frequency in the ER− and HER2− group. Our results among Saudis suggest that some variations in XRCC3 may contribute to breast cancer susceptibility. In conclusion, the results obtained during this study suggest that rs1799794 in XRCC3 shows strong association with breast cancer development in Saudi females. |
format | Online Article Text |
id | pubmed-4736606 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Hindawi Publishing Corporation |
record_format | MEDLINE/PubMed |
spelling | pubmed-47366062016-02-15 Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females Ali, Alaa Mohammed AbdulKareem, Huda Al Anazi, Mohammad Reddy Parine, Narasimha Shaik, Jilani Purusottapatnam Alamri, Abdullah Ali Khan Pathan, Akbar Warsy, Arjumand Biomed Res Int Research Article We investigated three common polymorphisms (SNPs) in the XRCC3 gene (rs861539, rs1799794, and rs1799796) in 143 Saudi females suffering from breast cancer (median age = 51.4 years) and 145 age matched normal healthy controls. DNA was extracted from whole blood and genotyping was conducted using PCR-RFLP. rs1799794 showed significant association, where AA and AA+AG occurred at a significantly higher frequency in the cancer patients compared to the control group (OR: 28.1; 95% CI: 3.76–21.12; χ (2): 22.82; p < 0.0001). The G allele was protective and presented with a dominant model. The genotype and allele frequencies of rs861539 C>T and rs1799796 A>G did not show a significant difference when the results in the patients and controls were compared. However, the frequency of rs1799796 differed significantly in patients with different age of diagnosis, tumor grade, and ER and HER2 status. The wild type A allele occurred at a higher frequency in the ER− and HER2− group. Our results among Saudis suggest that some variations in XRCC3 may contribute to breast cancer susceptibility. In conclusion, the results obtained during this study suggest that rs1799794 in XRCC3 shows strong association with breast cancer development in Saudi females. Hindawi Publishing Corporation 2016 2016-01-06 /pmc/articles/PMC4736606/ /pubmed/26881229 http://dx.doi.org/10.1155/2016/8721052 Text en Copyright © 2016 Alaa Mohammed Ali et al. https://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Ali, Alaa Mohammed AbdulKareem, Huda Al Anazi, Mohammad Reddy Parine, Narasimha Shaik, Jilani Purusottapatnam Alamri, Abdullah Ali Khan Pathan, Akbar Warsy, Arjumand Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title | Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title_full | Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title_fullStr | Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title_full_unstemmed | Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title_short | Polymorphisms in DNA Repair Gene XRCC3 and Susceptibility to Breast Cancer in Saudi Females |
title_sort | polymorphisms in dna repair gene xrcc3 and susceptibility to breast cancer in saudi females |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4736606/ https://www.ncbi.nlm.nih.gov/pubmed/26881229 http://dx.doi.org/10.1155/2016/8721052 |
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