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Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects

Identifying key performance traits is essential for elucidating crop growth processes and breeding. In Salix spp., genotypic diversity is being exploited to tailor new varieties to overcome environmental yield constraints. Process-based models can assist these efforts by identifying key parameters o...

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Autores principales: Cerasuolo, M., Richter, G. M., Richard, B., Cunniff, J., Girbau, S., Shield, I., Purdy, S, Karp, A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4737082/
https://www.ncbi.nlm.nih.gov/pubmed/26663471
http://dx.doi.org/10.1093/jxb/erv507
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author Cerasuolo, M.
Richter, G. M.
Richard, B.
Cunniff, J.
Girbau, S.
Shield, I.
Purdy, S
Karp, A.
author_facet Cerasuolo, M.
Richter, G. M.
Richard, B.
Cunniff, J.
Girbau, S.
Shield, I.
Purdy, S
Karp, A.
author_sort Cerasuolo, M.
collection PubMed
description Identifying key performance traits is essential for elucidating crop growth processes and breeding. In Salix spp., genotypic diversity is being exploited to tailor new varieties to overcome environmental yield constraints. Process-based models can assist these efforts by identifying key parameters of yield formation for different genotype×environment (G×E) combinations. Here, four commercial willow varieties grown in contrasting environments (west and south-east UK) were intensively sampled for growth traits over two 2-year rotations. A sink–source interaction model was developed to parameterize the balance of source (carbon capture/mobilization) and sink formation (morphogenesis, carbon allocation) during growth. Global sensitivity analysis consistently identified day length for the onset of stem elongation as most important factor for yield formation, followed by various ‘sink>source’ controlling parameters. In coastal climates, the chilling control of budburst ranked higher compared with the more eastern climate. Sensitivity to drought, including canopy size and rooting depth, was potentially growth limiting in the south-east and west of the UK. Potential yields increased from the first to the second rotation, but less so for broad- than for narrow-leaved varieties (20 and 47%, respectively), which had established less well initially (–19%). The establishment was confounded by drought during the first rotation, affecting broad- more than narrow-leaved canopy phenotypes (–29%). The analysis emphasized quantum efficiency at low light intensity as key to assimilation; however, on average, sink parameters were more important than source parameters. The G×E pairings described with this new process model will help to identify parameters of sink–source control for future willow breeding.
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spelling pubmed-47370822016-02-03 Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects Cerasuolo, M. Richter, G. M. Richard, B. Cunniff, J. Girbau, S. Shield, I. Purdy, S Karp, A. J Exp Bot Research Paper Identifying key performance traits is essential for elucidating crop growth processes and breeding. In Salix spp., genotypic diversity is being exploited to tailor new varieties to overcome environmental yield constraints. Process-based models can assist these efforts by identifying key parameters of yield formation for different genotype×environment (G×E) combinations. Here, four commercial willow varieties grown in contrasting environments (west and south-east UK) were intensively sampled for growth traits over two 2-year rotations. A sink–source interaction model was developed to parameterize the balance of source (carbon capture/mobilization) and sink formation (morphogenesis, carbon allocation) during growth. Global sensitivity analysis consistently identified day length for the onset of stem elongation as most important factor for yield formation, followed by various ‘sink>source’ controlling parameters. In coastal climates, the chilling control of budburst ranked higher compared with the more eastern climate. Sensitivity to drought, including canopy size and rooting depth, was potentially growth limiting in the south-east and west of the UK. Potential yields increased from the first to the second rotation, but less so for broad- than for narrow-leaved varieties (20 and 47%, respectively), which had established less well initially (–19%). The establishment was confounded by drought during the first rotation, affecting broad- more than narrow-leaved canopy phenotypes (–29%). The analysis emphasized quantum efficiency at low light intensity as key to assimilation; however, on average, sink parameters were more important than source parameters. The G×E pairings described with this new process model will help to identify parameters of sink–source control for future willow breeding. Oxford University Press 2016-02 2015-12-10 /pmc/articles/PMC4737082/ /pubmed/26663471 http://dx.doi.org/10.1093/jxb/erv507 Text en © The Author 2015. Published by Oxford University Press on behalf of the Society for Experimental Biology. http://creativecommons.org/licenses/by/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Paper
Cerasuolo, M.
Richter, G. M.
Richard, B.
Cunniff, J.
Girbau, S.
Shield, I.
Purdy, S
Karp, A.
Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title_full Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title_fullStr Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title_full_unstemmed Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title_short Development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
title_sort development of a sink–source interaction model for the growth of short-rotation coppice willow and in silico exploration of genotype×environment effects
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4737082/
https://www.ncbi.nlm.nih.gov/pubmed/26663471
http://dx.doi.org/10.1093/jxb/erv507
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