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Dam it's good! DamID profiling of protein‐DNA interactions

The interaction of proteins with chromatin is fundamental for several essential cellular processes. During the development of an organism, genes must to be tightly regulated both temporally and spatially. This is achieved through the action of chromatin‐binding proteins such as transcription factors...

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Detalles Bibliográficos
Autores principales: Aughey, Gabriel N., Southall, Tony D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley & Sons, Inc. 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4737221/
https://www.ncbi.nlm.nih.gov/pubmed/26383089
http://dx.doi.org/10.1002/wdev.205
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author Aughey, Gabriel N.
Southall, Tony D.
author_facet Aughey, Gabriel N.
Southall, Tony D.
author_sort Aughey, Gabriel N.
collection PubMed
description The interaction of proteins with chromatin is fundamental for several essential cellular processes. During the development of an organism, genes must to be tightly regulated both temporally and spatially. This is achieved through the action of chromatin‐binding proteins such as transcription factors, histone modifiers, nucleosome remodelers, and lamins. Furthermore, protein–DNA interactions are important in the adult, where their perturbation can lead to disruption of homeostasis, metabolic dysregulation, and diseases such as cancer. Understanding the nature of these interactions is of paramount importance in almost all areas of molecular biological research. In recent years, DNA adenine methyltransferase identification (DamID) has emerged as one of the most comprehensive and versatile methods available for profiling protein–DNA interactions on a genomic scale. DamID has been used to map a variety of chromatin‐binding proteins in several model organisms and has the potential for continued adaptation and application in the field of genomic biology. WIREs Dev Biol 2016, 5:25–37. doi: 10.1002/wdev.205 For further resources related to this article, please visit the WIREs website.
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spelling pubmed-47372212016-02-11 Dam it's good! DamID profiling of protein‐DNA interactions Aughey, Gabriel N. Southall, Tony D. Wiley Interdiscip Rev Dev Biol Overviews The interaction of proteins with chromatin is fundamental for several essential cellular processes. During the development of an organism, genes must to be tightly regulated both temporally and spatially. This is achieved through the action of chromatin‐binding proteins such as transcription factors, histone modifiers, nucleosome remodelers, and lamins. Furthermore, protein–DNA interactions are important in the adult, where their perturbation can lead to disruption of homeostasis, metabolic dysregulation, and diseases such as cancer. Understanding the nature of these interactions is of paramount importance in almost all areas of molecular biological research. In recent years, DNA adenine methyltransferase identification (DamID) has emerged as one of the most comprehensive and versatile methods available for profiling protein–DNA interactions on a genomic scale. DamID has been used to map a variety of chromatin‐binding proteins in several model organisms and has the potential for continued adaptation and application in the field of genomic biology. WIREs Dev Biol 2016, 5:25–37. doi: 10.1002/wdev.205 For further resources related to this article, please visit the WIREs website. John Wiley & Sons, Inc. 2015-09-18 2016-01 /pmc/articles/PMC4737221/ /pubmed/26383089 http://dx.doi.org/10.1002/wdev.205 Text en © 2015 The Authors. WIREs Developmental Biology published by Wiley Periodicals, Inc. This is an open access article under the terms of the Creative Commons Attribution (http://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Overviews
Aughey, Gabriel N.
Southall, Tony D.
Dam it's good! DamID profiling of protein‐DNA interactions
title Dam it's good! DamID profiling of protein‐DNA interactions
title_full Dam it's good! DamID profiling of protein‐DNA interactions
title_fullStr Dam it's good! DamID profiling of protein‐DNA interactions
title_full_unstemmed Dam it's good! DamID profiling of protein‐DNA interactions
title_short Dam it's good! DamID profiling of protein‐DNA interactions
title_sort dam it's good! damid profiling of protein‐dna interactions
topic Overviews
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4737221/
https://www.ncbi.nlm.nih.gov/pubmed/26383089
http://dx.doi.org/10.1002/wdev.205
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