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Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening

Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis pa...

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Autores principales: Hughes, Caryn, Clemens, Graeme, Bird, Benjamin, Dawson, Timothy, Ashton, Katherine M., Jenkinson, Michael D., Brodbelt, Andrew, Weida, Miles, Fotheringham, Edeline, Barre, Matthew, Rowlette, Jeremy, Baker, Matthew J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740754/
https://www.ncbi.nlm.nih.gov/pubmed/26842132
http://dx.doi.org/10.1038/srep20173
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author Hughes, Caryn
Clemens, Graeme
Bird, Benjamin
Dawson, Timothy
Ashton, Katherine M.
Jenkinson, Michael D.
Brodbelt, Andrew
Weida, Miles
Fotheringham, Edeline
Barre, Matthew
Rowlette, Jeremy
Baker, Matthew J.
author_facet Hughes, Caryn
Clemens, Graeme
Bird, Benjamin
Dawson, Timothy
Ashton, Katherine M.
Jenkinson, Michael D.
Brodbelt, Andrew
Weida, Miles
Fotheringham, Edeline
Barre, Matthew
Rowlette, Jeremy
Baker, Matthew J.
author_sort Hughes, Caryn
collection PubMed
description Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis paradigm for the biomedical laboratory. The exciting advent of tuneable quantum cascade lasers allows for the collection of discrete frequency infrared data enabling clinically relevant timescales. By scanning targeted frequencies spectral quality, reproducibility and diagnostic potential can be maintained while significantly reducing acquisition time and processing requirements, sampling 16 serum spots with 0.6, 5.1 and 15% relative standard deviation (RSD) for 199, 14 and 9 discrete frequencies respectively. We use this reproducible methodology to show proof of concept rapid diagnostics; 40 unique dried liquid biopsies from brain, breast, lung and skin cancer patients were classified in 2.4 cumulative seconds against 10 non-cancer controls with accuracies of up to 90%.
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spelling pubmed-47407542016-02-09 Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening Hughes, Caryn Clemens, Graeme Bird, Benjamin Dawson, Timothy Ashton, Katherine M. Jenkinson, Michael D. Brodbelt, Andrew Weida, Miles Fotheringham, Edeline Barre, Matthew Rowlette, Jeremy Baker, Matthew J. Sci Rep Article Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis paradigm for the biomedical laboratory. The exciting advent of tuneable quantum cascade lasers allows for the collection of discrete frequency infrared data enabling clinically relevant timescales. By scanning targeted frequencies spectral quality, reproducibility and diagnostic potential can be maintained while significantly reducing acquisition time and processing requirements, sampling 16 serum spots with 0.6, 5.1 and 15% relative standard deviation (RSD) for 199, 14 and 9 discrete frequencies respectively. We use this reproducible methodology to show proof of concept rapid diagnostics; 40 unique dried liquid biopsies from brain, breast, lung and skin cancer patients were classified in 2.4 cumulative seconds against 10 non-cancer controls with accuracies of up to 90%. Nature Publishing Group 2016-02-04 /pmc/articles/PMC4740754/ /pubmed/26842132 http://dx.doi.org/10.1038/srep20173 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Hughes, Caryn
Clemens, Graeme
Bird, Benjamin
Dawson, Timothy
Ashton, Katherine M.
Jenkinson, Michael D.
Brodbelt, Andrew
Weida, Miles
Fotheringham, Edeline
Barre, Matthew
Rowlette, Jeremy
Baker, Matthew J.
Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title_full Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title_fullStr Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title_full_unstemmed Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title_short Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
title_sort introducing discrete frequency infrared technology for high-throughput biofluid screening
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740754/
https://www.ncbi.nlm.nih.gov/pubmed/26842132
http://dx.doi.org/10.1038/srep20173
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