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Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening
Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis pa...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740754/ https://www.ncbi.nlm.nih.gov/pubmed/26842132 http://dx.doi.org/10.1038/srep20173 |
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author | Hughes, Caryn Clemens, Graeme Bird, Benjamin Dawson, Timothy Ashton, Katherine M. Jenkinson, Michael D. Brodbelt, Andrew Weida, Miles Fotheringham, Edeline Barre, Matthew Rowlette, Jeremy Baker, Matthew J. |
author_facet | Hughes, Caryn Clemens, Graeme Bird, Benjamin Dawson, Timothy Ashton, Katherine M. Jenkinson, Michael D. Brodbelt, Andrew Weida, Miles Fotheringham, Edeline Barre, Matthew Rowlette, Jeremy Baker, Matthew J. |
author_sort | Hughes, Caryn |
collection | PubMed |
description | Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis paradigm for the biomedical laboratory. The exciting advent of tuneable quantum cascade lasers allows for the collection of discrete frequency infrared data enabling clinically relevant timescales. By scanning targeted frequencies spectral quality, reproducibility and diagnostic potential can be maintained while significantly reducing acquisition time and processing requirements, sampling 16 serum spots with 0.6, 5.1 and 15% relative standard deviation (RSD) for 199, 14 and 9 discrete frequencies respectively. We use this reproducible methodology to show proof of concept rapid diagnostics; 40 unique dried liquid biopsies from brain, breast, lung and skin cancer patients were classified in 2.4 cumulative seconds against 10 non-cancer controls with accuracies of up to 90%. |
format | Online Article Text |
id | pubmed-4740754 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47407542016-02-09 Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening Hughes, Caryn Clemens, Graeme Bird, Benjamin Dawson, Timothy Ashton, Katherine M. Jenkinson, Michael D. Brodbelt, Andrew Weida, Miles Fotheringham, Edeline Barre, Matthew Rowlette, Jeremy Baker, Matthew J. Sci Rep Article Accurate early diagnosis is critical to patient survival, management and quality of life. Biofluids are key to early diagnosis due to their ease of collection and intimate involvement in human function. Large-scale mid-IR imaging of dried fluid deposits offers a high-throughput molecular analysis paradigm for the biomedical laboratory. The exciting advent of tuneable quantum cascade lasers allows for the collection of discrete frequency infrared data enabling clinically relevant timescales. By scanning targeted frequencies spectral quality, reproducibility and diagnostic potential can be maintained while significantly reducing acquisition time and processing requirements, sampling 16 serum spots with 0.6, 5.1 and 15% relative standard deviation (RSD) for 199, 14 and 9 discrete frequencies respectively. We use this reproducible methodology to show proof of concept rapid diagnostics; 40 unique dried liquid biopsies from brain, breast, lung and skin cancer patients were classified in 2.4 cumulative seconds against 10 non-cancer controls with accuracies of up to 90%. Nature Publishing Group 2016-02-04 /pmc/articles/PMC4740754/ /pubmed/26842132 http://dx.doi.org/10.1038/srep20173 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Hughes, Caryn Clemens, Graeme Bird, Benjamin Dawson, Timothy Ashton, Katherine M. Jenkinson, Michael D. Brodbelt, Andrew Weida, Miles Fotheringham, Edeline Barre, Matthew Rowlette, Jeremy Baker, Matthew J. Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title | Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title_full | Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title_fullStr | Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title_full_unstemmed | Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title_short | Introducing Discrete Frequency Infrared Technology for High-Throughput Biofluid Screening |
title_sort | introducing discrete frequency infrared technology for high-throughput biofluid screening |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740754/ https://www.ncbi.nlm.nih.gov/pubmed/26842132 http://dx.doi.org/10.1038/srep20173 |
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