Cargando…

Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience

BACKGROUND: Early diagnosis of infants infected with HIV (EID) and early initiation of treatment significantly reduces the rate of disease progression and mortality. One of the challenges to identification of HIV-1-infected infants is availability and/or access to quality molecular laboratory facili...

Descripción completa

Detalles Bibliográficos
Autores principales: Fonjungo, Peter N., Girma, Mulu, Melaku, Zenebe, Mekonen, Teferi, Tanuri, Amilcar, Hailegiorgis, Bereket, Tegbaru, Belete, Mengistu, Yohannes, Ashenafi, Aytenew, Mamo, Wubshet, Abreha, Tesfay, Tibesso, Gudetta, Ramos, Artur, Ayana, Gonfa, Freeman, Richard, Nkengasong, John N., Zewdu, Solomon, Kebede, Yenew, Abebe, Almaz, Kenyon, Thomas A., Messele, Tsehaynesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AOSIS OpenJournals 2013
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740918/
https://www.ncbi.nlm.nih.gov/pubmed/26855901
http://dx.doi.org/10.4102/ajlm.v2i1.31
_version_ 1782413916505112576
author Fonjungo, Peter N.
Girma, Mulu
Melaku, Zenebe
Mekonen, Teferi
Tanuri, Amilcar
Hailegiorgis, Bereket
Tegbaru, Belete
Mengistu, Yohannes
Ashenafi, Aytenew
Mamo, Wubshet
Abreha, Tesfay
Tibesso, Gudetta
Ramos, Artur
Ayana, Gonfa
Freeman, Richard
Nkengasong, John N.
Zewdu, Solomon
Kebede, Yenew
Abebe, Almaz
Kenyon, Thomas A.
Messele, Tsehaynesh
author_facet Fonjungo, Peter N.
Girma, Mulu
Melaku, Zenebe
Mekonen, Teferi
Tanuri, Amilcar
Hailegiorgis, Bereket
Tegbaru, Belete
Mengistu, Yohannes
Ashenafi, Aytenew
Mamo, Wubshet
Abreha, Tesfay
Tibesso, Gudetta
Ramos, Artur
Ayana, Gonfa
Freeman, Richard
Nkengasong, John N.
Zewdu, Solomon
Kebede, Yenew
Abebe, Almaz
Kenyon, Thomas A.
Messele, Tsehaynesh
author_sort Fonjungo, Peter N.
collection PubMed
description BACKGROUND: Early diagnosis of infants infected with HIV (EID) and early initiation of treatment significantly reduces the rate of disease progression and mortality. One of the challenges to identification of HIV-1-infected infants is availability and/or access to quality molecular laboratory facilities which perform molecular virologic assays suitable for accurate identification of the HIV status of infants. METHOD: We conducted a joint site assessment and designed laboratories for the expansion of DNA polymerase chain reaction (PCR) testing based on dried blood spot (DBS) for EID in six regions of Ethiopia. Training of appropriate laboratory technologists and development of required documentation including standard operating procedures (SOPs) was carried out. The impact of the expansion of EID laboratories was assessed by the number of tests performed as well as the turn-around time. RESULTS: DNA PCR for EID was introduced in 2008 in six regions. From April 2006 to April 2008, a total of 2848 infants had been tested centrally at the Ethiopian Health and Nutrition Research Institute (EHNRI) in Addis Ababa, and which was then the only laboratory with the capability to perform EID; 546 (19.2%) of the samples were positive. By November 2010, EHNRI and the six laboratories had tested an additional 16 985 HIV-exposed infants, of which 1915 (11.3%) were positive. The median turn-around time for test results was 14 days (range 14–21 days). CONCLUSION: Expansion of HIV DNA PCR testing facilities that can provide quality and reliable results is feasible in resource-limited settings. Regular supervision and monitoring for quality assurance of these laboratories is essential to maintain accuracy of testing.
format Online
Article
Text
id pubmed-4740918
institution National Center for Biotechnology Information
language English
publishDate 2013
publisher AOSIS OpenJournals
record_format MEDLINE/PubMed
spelling pubmed-47409182016-02-04 Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience Fonjungo, Peter N. Girma, Mulu Melaku, Zenebe Mekonen, Teferi Tanuri, Amilcar Hailegiorgis, Bereket Tegbaru, Belete Mengistu, Yohannes Ashenafi, Aytenew Mamo, Wubshet Abreha, Tesfay Tibesso, Gudetta Ramos, Artur Ayana, Gonfa Freeman, Richard Nkengasong, John N. Zewdu, Solomon Kebede, Yenew Abebe, Almaz Kenyon, Thomas A. Messele, Tsehaynesh Afr J Lab Med Lessons from the Field BACKGROUND: Early diagnosis of infants infected with HIV (EID) and early initiation of treatment significantly reduces the rate of disease progression and mortality. One of the challenges to identification of HIV-1-infected infants is availability and/or access to quality molecular laboratory facilities which perform molecular virologic assays suitable for accurate identification of the HIV status of infants. METHOD: We conducted a joint site assessment and designed laboratories for the expansion of DNA polymerase chain reaction (PCR) testing based on dried blood spot (DBS) for EID in six regions of Ethiopia. Training of appropriate laboratory technologists and development of required documentation including standard operating procedures (SOPs) was carried out. The impact of the expansion of EID laboratories was assessed by the number of tests performed as well as the turn-around time. RESULTS: DNA PCR for EID was introduced in 2008 in six regions. From April 2006 to April 2008, a total of 2848 infants had been tested centrally at the Ethiopian Health and Nutrition Research Institute (EHNRI) in Addis Ababa, and which was then the only laboratory with the capability to perform EID; 546 (19.2%) of the samples were positive. By November 2010, EHNRI and the six laboratories had tested an additional 16 985 HIV-exposed infants, of which 1915 (11.3%) were positive. The median turn-around time for test results was 14 days (range 14–21 days). CONCLUSION: Expansion of HIV DNA PCR testing facilities that can provide quality and reliable results is feasible in resource-limited settings. Regular supervision and monitoring for quality assurance of these laboratories is essential to maintain accuracy of testing. AOSIS OpenJournals 2013-05-22 /pmc/articles/PMC4740918/ /pubmed/26855901 http://dx.doi.org/10.4102/ajlm.v2i1.31 Text en © 2013. The Authors https://creativecommons.org/licenses/by/4.0/ Licensee: AOSIS OpenJournals. This work is licensed under the Creative Commons Attribution License.
spellingShingle Lessons from the Field
Fonjungo, Peter N.
Girma, Mulu
Melaku, Zenebe
Mekonen, Teferi
Tanuri, Amilcar
Hailegiorgis, Bereket
Tegbaru, Belete
Mengistu, Yohannes
Ashenafi, Aytenew
Mamo, Wubshet
Abreha, Tesfay
Tibesso, Gudetta
Ramos, Artur
Ayana, Gonfa
Freeman, Richard
Nkengasong, John N.
Zewdu, Solomon
Kebede, Yenew
Abebe, Almaz
Kenyon, Thomas A.
Messele, Tsehaynesh
Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title_full Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title_fullStr Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title_full_unstemmed Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title_short Field expansion of DNA polymerase chain reaction for early infant diagnosis of HIV-1: The Ethiopian experience
title_sort field expansion of dna polymerase chain reaction for early infant diagnosis of hiv-1: the ethiopian experience
topic Lessons from the Field
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4740918/
https://www.ncbi.nlm.nih.gov/pubmed/26855901
http://dx.doi.org/10.4102/ajlm.v2i1.31
work_keys_str_mv AT fonjungopetern fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT girmamulu fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT melakuzenebe fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT mekonenteferi fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT tanuriamilcar fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT hailegiorgisbereket fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT tegbarubelete fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT mengistuyohannes fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT ashenafiaytenew fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT mamowubshet fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT abrehatesfay fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT tibessogudetta fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT ramosartur fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT ayanagonfa fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT freemanrichard fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT nkengasongjohnn fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT zewdusolomon fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT kebedeyenew fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT abebealmaz fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT kenyonthomasa fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience
AT messeletsehaynesh fieldexpansionofdnapolymerasechainreactionforearlyinfantdiagnosisofhiv1theethiopianexperience