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A betabaculovirus encoding a gp64 homolog
BACKGROUND: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. RESULTS: The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. Th...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741009/ https://www.ncbi.nlm.nih.gov/pubmed/26847652 http://dx.doi.org/10.1186/s12864-016-2408-9 |
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author | Ardisson-Araújo, Daniel M P. Pereira, Bruna T. Melo, Fernando L. Ribeiro, Bergmann M. Báo, Sônia N. de A. Zanotto, Paolo M. Moscardi, Flávio Kitajima, Elliot W. Sosa-Gomez, Daniel R. Wolff, José L. C. |
author_facet | Ardisson-Araújo, Daniel M P. Pereira, Bruna T. Melo, Fernando L. Ribeiro, Bergmann M. Báo, Sônia N. de A. Zanotto, Paolo M. Moscardi, Flávio Kitajima, Elliot W. Sosa-Gomez, Daniel R. Wolff, José L. C. |
author_sort | Ardisson-Araújo, Daniel M P. |
collection | PubMed |
description | BACKGROUND: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. RESULTS: The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. CONCLUSION: DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2408-9) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4741009 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-47410092016-02-05 A betabaculovirus encoding a gp64 homolog Ardisson-Araújo, Daniel M P. Pereira, Bruna T. Melo, Fernando L. Ribeiro, Bergmann M. Báo, Sônia N. de A. Zanotto, Paolo M. Moscardi, Flávio Kitajima, Elliot W. Sosa-Gomez, Daniel R. Wolff, José L. C. BMC Genomics Research Article BACKGROUND: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil. RESULTS: The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7 % encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses. CONCLUSION: DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s12864-016-2408-9) contains supplementary material, which is available to authorized users. BioMed Central 2016-02-04 /pmc/articles/PMC4741009/ /pubmed/26847652 http://dx.doi.org/10.1186/s12864-016-2408-9 Text en © Ardisson-Araújo et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Ardisson-Araújo, Daniel M P. Pereira, Bruna T. Melo, Fernando L. Ribeiro, Bergmann M. Báo, Sônia N. de A. Zanotto, Paolo M. Moscardi, Flávio Kitajima, Elliot W. Sosa-Gomez, Daniel R. Wolff, José L. C. A betabaculovirus encoding a gp64 homolog |
title | A betabaculovirus encoding a gp64 homolog |
title_full | A betabaculovirus encoding a gp64 homolog |
title_fullStr | A betabaculovirus encoding a gp64 homolog |
title_full_unstemmed | A betabaculovirus encoding a gp64 homolog |
title_short | A betabaculovirus encoding a gp64 homolog |
title_sort | betabaculovirus encoding a gp64 homolog |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741009/ https://www.ncbi.nlm.nih.gov/pubmed/26847652 http://dx.doi.org/10.1186/s12864-016-2408-9 |
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