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CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer

Colorectal cancer (CRC) is the third leading cause of global cancer mortality. Recent studies have proposed several gene signatures to predict CRC prognosis, but none of those have proven reliable for predicting prognosis in clinical practice yet due to poor reproducibility and molecular heterogenei...

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Autores principales: Nguyen, Minh Nam, Choi, Tae Gyu, Nguyen, Dinh Truong, Kim, Jin-Hwan, Jo, Yong Hwa, Shahid, Muhammad, Akter, Salima, Aryal, Saurav Nath, Yoo, Ji Youn, Ahn, Yong-Joo, Cho, Kyoung Min, Lee, Ju-Seog, Choe, Wonchae, Kang, Insug, Ha, Joohun, Kim, Sung Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741632/
https://www.ncbi.nlm.nih.gov/pubmed/26397224
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author Nguyen, Minh Nam
Choi, Tae Gyu
Nguyen, Dinh Truong
Kim, Jin-Hwan
Jo, Yong Hwa
Shahid, Muhammad
Akter, Salima
Aryal, Saurav Nath
Yoo, Ji Youn
Ahn, Yong-Joo
Cho, Kyoung Min
Lee, Ju-Seog
Choe, Wonchae
Kang, Insug
Ha, Joohun
Kim, Sung Soo
author_facet Nguyen, Minh Nam
Choi, Tae Gyu
Nguyen, Dinh Truong
Kim, Jin-Hwan
Jo, Yong Hwa
Shahid, Muhammad
Akter, Salima
Aryal, Saurav Nath
Yoo, Ji Youn
Ahn, Yong-Joo
Cho, Kyoung Min
Lee, Ju-Seog
Choe, Wonchae
Kang, Insug
Ha, Joohun
Kim, Sung Soo
author_sort Nguyen, Minh Nam
collection PubMed
description Colorectal cancer (CRC) is the third leading cause of global cancer mortality. Recent studies have proposed several gene signatures to predict CRC prognosis, but none of those have proven reliable for predicting prognosis in clinical practice yet due to poor reproducibility and molecular heterogeneity. Here, we have established a prognostic signature of 113 probe sets (CRC-113) that include potential biomarkers and reflect the biological and clinical characteristics. Robustness and accuracy were significantly validated in external data sets from 19 centers in five countries. In multivariate analysis, CRC-113 gene signature showed a stronger prognostic value for survival and disease recurrence in CRC patients than current clinicopathological risk factors and molecular alterations. We also demonstrated that the CRC-113 gene signature reflected both genetic and epigenetic molecular heterogeneity in CRC patients. Furthermore, incorporation of the CRC-113 gene signature into a clinical context and molecular markers further refined the selection of the CRC patients who might benefit from postoperative chemotherapy. Conclusively, CRC-113 gene signature provides new possibilities for improving prognostic models and personalized therapeutic strategies.
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spelling pubmed-47416322016-03-03 CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer Nguyen, Minh Nam Choi, Tae Gyu Nguyen, Dinh Truong Kim, Jin-Hwan Jo, Yong Hwa Shahid, Muhammad Akter, Salima Aryal, Saurav Nath Yoo, Ji Youn Ahn, Yong-Joo Cho, Kyoung Min Lee, Ju-Seog Choe, Wonchae Kang, Insug Ha, Joohun Kim, Sung Soo Oncotarget Research Paper Colorectal cancer (CRC) is the third leading cause of global cancer mortality. Recent studies have proposed several gene signatures to predict CRC prognosis, but none of those have proven reliable for predicting prognosis in clinical practice yet due to poor reproducibility and molecular heterogeneity. Here, we have established a prognostic signature of 113 probe sets (CRC-113) that include potential biomarkers and reflect the biological and clinical characteristics. Robustness and accuracy were significantly validated in external data sets from 19 centers in five countries. In multivariate analysis, CRC-113 gene signature showed a stronger prognostic value for survival and disease recurrence in CRC patients than current clinicopathological risk factors and molecular alterations. We also demonstrated that the CRC-113 gene signature reflected both genetic and epigenetic molecular heterogeneity in CRC patients. Furthermore, incorporation of the CRC-113 gene signature into a clinical context and molecular markers further refined the selection of the CRC patients who might benefit from postoperative chemotherapy. Conclusively, CRC-113 gene signature provides new possibilities for improving prognostic models and personalized therapeutic strategies. Impact Journals LLC 2015-09-11 /pmc/articles/PMC4741632/ /pubmed/26397224 Text en Copyright: © 2015 Nguyen et al. http://creativecommons.org/licenses/by/2.5/ This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Nguyen, Minh Nam
Choi, Tae Gyu
Nguyen, Dinh Truong
Kim, Jin-Hwan
Jo, Yong Hwa
Shahid, Muhammad
Akter, Salima
Aryal, Saurav Nath
Yoo, Ji Youn
Ahn, Yong-Joo
Cho, Kyoung Min
Lee, Ju-Seog
Choe, Wonchae
Kang, Insug
Ha, Joohun
Kim, Sung Soo
CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title_full CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title_fullStr CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title_full_unstemmed CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title_short CRC-113 gene expression signature for predicting prognosis in patients with colorectal cancer
title_sort crc-113 gene expression signature for predicting prognosis in patients with colorectal cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4741632/
https://www.ncbi.nlm.nih.gov/pubmed/26397224
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