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Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans

Fulminant type 1 diabetes (T1DM) is a distinct subtype of T1DM that is characterized by rapid onset hyperglycemia, ketoacidosis, absolute insulin deficiency, and near normal levels of glycated hemoglobin at initial presentation. Although it has been reported that class II human leukocyte antigen (HL...

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Autores principales: Kwak, Soo Heon, Kim, Yoon Ji, Chae, Jeesoo, Lee, Cue Hyunkyu, Han, Buhm, Kim, Jong-Il, Jung, Hye Seung, Cho, Young Min, Park, Kyong Soo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Korea Genome Organization 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4742322/
https://www.ncbi.nlm.nih.gov/pubmed/26865843
http://dx.doi.org/10.5808/GI.2015.13.4.126
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author Kwak, Soo Heon
Kim, Yoon Ji
Chae, Jeesoo
Lee, Cue Hyunkyu
Han, Buhm
Kim, Jong-Il
Jung, Hye Seung
Cho, Young Min
Park, Kyong Soo
author_facet Kwak, Soo Heon
Kim, Yoon Ji
Chae, Jeesoo
Lee, Cue Hyunkyu
Han, Buhm
Kim, Jong-Il
Jung, Hye Seung
Cho, Young Min
Park, Kyong Soo
author_sort Kwak, Soo Heon
collection PubMed
description Fulminant type 1 diabetes (T1DM) is a distinct subtype of T1DM that is characterized by rapid onset hyperglycemia, ketoacidosis, absolute insulin deficiency, and near normal levels of glycated hemoglobin at initial presentation. Although it has been reported that class II human leukocyte antigen (HLA) genotype is associated with fulminant T1DM, the genetic predisposition is not fully understood. In this study we investigated the HLA genotype and haplotype in 11 Korean cases of fulminant T1DM using imputation of whole exome sequencing data and compared its frequencies with 413 participants of the Korean Reference Panel. The HLA-DRB1*04:05–HLA-DQB1*04:01 haplotype was significantly associated with increased risk of fulminant T1DM in Fisher's exact test (odds ratio [OR], 4.11; 95% confidence interval [CI], 1.56 to 10.86; p = 0.009). A histidine residue at HLA-DRβ1 position 13 was marginally associated with increased risk of fulminant T1DM (OR, 2.45; 95% CI ,1.01 to 5.94; p = 0.054). Although we had limited statistical power, we provide evidence that HLA haplotype and amino acid change can be a genetic risk factor of fulminant T1DM in Koreans. Further large-scale research is required to confirm these findings.
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spelling pubmed-47423222016-02-10 Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans Kwak, Soo Heon Kim, Yoon Ji Chae, Jeesoo Lee, Cue Hyunkyu Han, Buhm Kim, Jong-Il Jung, Hye Seung Cho, Young Min Park, Kyong Soo Genomics Inform Original Article Fulminant type 1 diabetes (T1DM) is a distinct subtype of T1DM that is characterized by rapid onset hyperglycemia, ketoacidosis, absolute insulin deficiency, and near normal levels of glycated hemoglobin at initial presentation. Although it has been reported that class II human leukocyte antigen (HLA) genotype is associated with fulminant T1DM, the genetic predisposition is not fully understood. In this study we investigated the HLA genotype and haplotype in 11 Korean cases of fulminant T1DM using imputation of whole exome sequencing data and compared its frequencies with 413 participants of the Korean Reference Panel. The HLA-DRB1*04:05–HLA-DQB1*04:01 haplotype was significantly associated with increased risk of fulminant T1DM in Fisher's exact test (odds ratio [OR], 4.11; 95% confidence interval [CI], 1.56 to 10.86; p = 0.009). A histidine residue at HLA-DRβ1 position 13 was marginally associated with increased risk of fulminant T1DM (OR, 2.45; 95% CI ,1.01 to 5.94; p = 0.054). Although we had limited statistical power, we provide evidence that HLA haplotype and amino acid change can be a genetic risk factor of fulminant T1DM in Koreans. Further large-scale research is required to confirm these findings. Korea Genome Organization 2015-12 2015-12-31 /pmc/articles/PMC4742322/ /pubmed/26865843 http://dx.doi.org/10.5808/GI.2015.13.4.126 Text en Copyright © 2015 by the Korea Genome Organization http://creativecommons.org/licenses/by-nc/4.0/ It is identical to the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/).
spellingShingle Original Article
Kwak, Soo Heon
Kim, Yoon Ji
Chae, Jeesoo
Lee, Cue Hyunkyu
Han, Buhm
Kim, Jong-Il
Jung, Hye Seung
Cho, Young Min
Park, Kyong Soo
Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title_full Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title_fullStr Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title_full_unstemmed Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title_short Association of HLA Genotype and Fulminant Type 1 Diabetes in Koreans
title_sort association of hla genotype and fulminant type 1 diabetes in koreans
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4742322/
https://www.ncbi.nlm.nih.gov/pubmed/26865843
http://dx.doi.org/10.5808/GI.2015.13.4.126
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