SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis

BACKGROUND: Many tools exist in the analysis of bacterial RNA sequencing (RNA-seq) transcriptional profiling experiments to identify differentially expressed genes between experimental conditions. Generally, the workflow includes quality control of reads, mapping to a reference, counting transcript...

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Detalles Bibliográficos
Autores principales: Johnson, Benjamin K., Scholz, Matthew B., Teal, Tracy K., Abramovitch, Robert B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2016
Materias:
Software
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743240/
https://www.ncbi.nlm.nih.gov/pubmed/26847232
http://dx.doi.org/10.1186/s12859-016-0923-y

Internet

https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743240/
https://www.ncbi.nlm.nih.gov/pubmed/26847232
http://dx.doi.org/10.1186/s12859-016-0923-y

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