Cargando…

Enhanceosome transcription factors preferentially dimerize with high mobility group proteins

BACKGROUND: The enhanceosome is an enhancer located upstream of the human interferon β gene, bound by transcription factor (TF) complex of extremely rigid structure. Within these rigid constraints, even a slight change of distances between transcription factor binding sites (TFBS) results in loss of...

Descripción completa

Detalles Bibliográficos
Autores principales:	Jankowski, Aleksander, Obara, Paulina, Mathur, Utsav, Tiuryn, Jerzy
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2016
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743414/ https://www.ncbi.nlm.nih.gov/pubmed/26847699 http://dx.doi.org/10.1186/s12918-016-0258-3

Ejemplares similares

TACO: a general-purpose tool for predicting cell-type–specific transcription factor dimers
por: Jankowski, Aleksander, et al.
Publicado: (2014)

Comprehensive prediction in 78 human cell lines reveals rigidity and compactness of transcription factor dimers
por: Jankowski, Aleksander, et al.
Publicado: (2013)

Romulus: robust multi-state identification of transcription factor binding sites from DNase-seq data
por: Jankowski, Aleksander, et al.
Publicado: (2016)

SOXE transcription factors form selective dimers on non-compact DNA motifs through multifaceted interactions between dimerization and high-mobility group domains
por: Huang, Yong-Heng, et al.
Publicado: (2015)

The Role of Response Elements Organization in Transcription Factor Selectivity: The IFN-β Enhanceosome Example
por: Pan, Yongping, et al.
Publicado: (2011)

UXT is a novel and essential cofactor in the NF-κB transcriptional enhanceosome
por: Sun, Shaogang, et al.
Publicado: (2007)

Myeloid-Derived Suppressor Cell Differentiation in Cancer: Transcriptional Regulators and Enhanceosome-Mediated Mechanisms
por: Fultang, Norman, et al.
Publicado: (2021)

Analysis of replacing DNase-seq data with histone marks in computational dimer prediction
por: Osamor, Victor Chukwudi, et al.
Publicado: (2015)

Characterization of RNA helicase A as component of STAT6-dependent enhanceosome
por: Välineva, Tuuli, et al.
Publicado: (2006)

An ancient Pygo-dependent Wnt enhanceosome integrated by Chip/LDB-SSDP
por: Fiedler, Marc, et al.
Publicado: (2015)

Constitutive scaffolding of multiple Wnt enhanceosome components by Legless/BCL9
por: van Tienen, Laurens M, et al.
Publicado: (2017)

Inherited Human XY Sex Reversal and Gonadal Neoplasia Due to Enhanced Formation of Non-Specific Enhanceosomes by an Architectural Transcription Factor
por: Chen, Yen-Shan, et al.
Publicado: (2021)

Correction: Constitutive scaffolding of multiple Wnt enhanceosome components by Legless/BCL9
por: van Tienen, Laurens M, et al.
Publicado: (2017)

Rotational symmetry of the structured Chip/LDB-SSDP core module of the Wnt enhanceosome
por: Renko, Miha, et al.
Publicado: (2019)

Structure of p300 bound to MEF2 on DNA reveals a mechanism of enhanceosome assembly
por: He, Ju, et al.
Publicado: (2011)

The Dimerization State of the Mammalian High Mobility Group Protein AT-Hook 2 (HMGA2)
por: Frost, Lorraine, et al.
Publicado: (2015)

Defining Emerging Roles for NF-κB in Antivirus Responses: Revisiting the Interferon-β Enhanceosome Paradigm
por: Balachandran, Siddharth, et al.
Publicado: (2011)

Structural basis of the interaction between BCL9-Pygo and LDB-SSBP complexes in assembling the Wnt enhanceosome
por: Wang, Hongyang, et al.
Publicado: (2023)

LPS-induced NFκB enhanceosome requires TonEBP/NFAT5 without DNA binding
por: Lee, Hwan Hee, et al.
Publicado: (2016)

A Model for Dimerization of the SOX Group E Transcription Factor Family
por: Ramsook, Sarah N., et al.
Publicado: (2016)

Phylogeny-guided interaction mapping in seven eukaryotes
por: Dutkowski, Janusz, et al.
Publicado: (2009)

Learning signaling networks from combinatorial perturbations by exploiting siRNA off-target effects
por: Tiuryn, Jerzy, et al.
Publicado: (2019)

High mobility group proteins of amphibian oocytes: a large storage pool of a soluble high mobility group-1-like protein and involvement in transcriptional events
Publicado: (1983)

The high-mobility-group domain of Sox proteins interacts with DNA-binding domains of many transcription factors
por: Wißmüller, Sandra, et al.
Publicado: (2006)

Wild-type and cancer-related p53 proteins are preferentially degraded by MDM2 as dimers rather than tetramers
por: Katz, Chen, et al.
Publicado: (2018)

Bioinformatics and Computational Biology in Poland
por: Bujnicki, Janusz M., et al.
Publicado: (2013)

High Mobility Group Proteins in Sepsis
por: Liang, Guibin, et al.
Publicado: (2022)

CAMBer: an approach to support comparative analysis of multiple bacterial strains
por: Wozniak, Michal, et al.
Publicado: (2011)

eCAMBer: efficient support for large-scale comparative analysis of multiple bacterial strains
por: Wozniak, Michal, et al.
Publicado: (2014)

An approach to identifying drug resistance associated mutations in bacterial strains
por: Wozniak, Michal, et al.
Publicado: (2012)

GWAMAR: Genome-wide assessment of mutations associated with drug resistance in bacteria
por: Wozniak, Michal, et al.
Publicado: (2014)

A spectrum of preferential flow alters solute mobility in soils
por: Radolinski, Jesse, et al.
Publicado: (2022)

Transcriptional activation by mitochondrial transcription factor A involves preferential distortion of promoter DNA
por: Malarkey, Christopher S., et al.
Publicado: (2012)

Mutational processes in cancer preferentially affect binding of particular transcription factors
por: Liu, Mo, et al.
Publicado: (2021)

High Mobility Group A Proteins as Tumor Markers
por: Pallante, Pierlorenzo, et al.
Publicado: (2015)

The high mobility group transcription factor Sox8 is a negative regulator of osteoblast differentiation
por: Schmidt, Katy, et al.
Publicado: (2005)

Finding evolutionarily conserved cis-regulatory modules with a universal set of motifs
por: Wilczynski, Bartek, et al.
Publicado: (2009)

The Epstein–Barr virus nuclear antigen-1 reprograms transcription by mimicry of high mobility group A proteins
por: Coppotelli, Giuseppe, et al.
Publicado: (2013)

Preferential Interactions and the Effect of Protein PEGylation
por: Holm, Louise Stenstrup, et al.
Publicado: (2015)

Platelet-Derived Chemokine CXCL7 Dimer Preferentially Exists in the Glycosaminoglycan-Bound Form: Implications for Neutrophil–Platelet Crosstalk
por: Brown, Aaron J., et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_koalv2pkelcaod3iumd6rep4ni