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openBIS ELN-LIMS: an open-source database for academic laboratories
Summary: The open-source platform openBIS (open Biology Information System) offers an Electronic Laboratory Notebook and a Laboratory Information Management System (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document the...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743625/ https://www.ncbi.nlm.nih.gov/pubmed/26508761 http://dx.doi.org/10.1093/bioinformatics/btv606 |
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author | Barillari, Caterina Ottoz, Diana S. M. Fuentes-Serna, Juan Mariano Ramakrishnan, Chandrasekhar Rinn, Bernd Rudolf, Fabian |
author_facet | Barillari, Caterina Ottoz, Diana S. M. Fuentes-Serna, Juan Mariano Ramakrishnan, Chandrasekhar Rinn, Bernd Rudolf, Fabian |
author_sort | Barillari, Caterina |
collection | PubMed |
description | Summary: The open-source platform openBIS (open Biology Information System) offers an Electronic Laboratory Notebook and a Laboratory Information Management System (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document their work, to describe materials and methods and to collect raw and analyzed data. The system comes with a user-friendly web interface where data can be added, edited, browsed and searched. Availability and implementation: The openBIS software, a user guide and a demo instance are available at https://openbis-eln-lims.ethz.ch. The demo instance contains some data from our laboratory as an example to demonstrate the possibilities of the ELN-LIMS (Ottoz et al., 2014). For rapid local testing, a VirtualBox image of the ELN-LIMS is also available. Contact: brinn@ethz.ch or fabian.rudolf@bsse.ethz.ch |
format | Online Article Text |
id | pubmed-4743625 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47436252016-02-08 openBIS ELN-LIMS: an open-source database for academic laboratories Barillari, Caterina Ottoz, Diana S. M. Fuentes-Serna, Juan Mariano Ramakrishnan, Chandrasekhar Rinn, Bernd Rudolf, Fabian Bioinformatics Applications Notes Summary: The open-source platform openBIS (open Biology Information System) offers an Electronic Laboratory Notebook and a Laboratory Information Management System (ELN-LIMS) solution suitable for the academic life science laboratories. openBIS ELN-LIMS allows researchers to efficiently document their work, to describe materials and methods and to collect raw and analyzed data. The system comes with a user-friendly web interface where data can be added, edited, browsed and searched. Availability and implementation: The openBIS software, a user guide and a demo instance are available at https://openbis-eln-lims.ethz.ch. The demo instance contains some data from our laboratory as an example to demonstrate the possibilities of the ELN-LIMS (Ottoz et al., 2014). For rapid local testing, a VirtualBox image of the ELN-LIMS is also available. Contact: brinn@ethz.ch or fabian.rudolf@bsse.ethz.ch Oxford University Press 2016-02-15 2015-10-27 /pmc/articles/PMC4743625/ /pubmed/26508761 http://dx.doi.org/10.1093/bioinformatics/btv606 Text en © The Author 2015. Published by Oxford University Press. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Applications Notes Barillari, Caterina Ottoz, Diana S. M. Fuentes-Serna, Juan Mariano Ramakrishnan, Chandrasekhar Rinn, Bernd Rudolf, Fabian openBIS ELN-LIMS: an open-source database for academic laboratories |
title | openBIS ELN-LIMS: an open-source database for academic laboratories |
title_full | openBIS ELN-LIMS: an open-source database for academic laboratories |
title_fullStr | openBIS ELN-LIMS: an open-source database for academic laboratories |
title_full_unstemmed | openBIS ELN-LIMS: an open-source database for academic laboratories |
title_short | openBIS ELN-LIMS: an open-source database for academic laboratories |
title_sort | openbis eln-lims: an open-source database for academic laboratories |
topic | Applications Notes |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4743625/ https://www.ncbi.nlm.nih.gov/pubmed/26508761 http://dx.doi.org/10.1093/bioinformatics/btv606 |
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