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Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida

Environmental metabolomics studies employing earthworms as sentinels for soil contamination are numerous, but the instability of the metabolite extracts from these organisms has been minimally addressed. This study evaluated the efficacy of adding a heat-treatment step in two commonly used extractio...

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Detalles Bibliográficos
Autores principales: Schock, Tracey B., Strickland, Sheri, Steele, Edna J., Bearden, Daniel W.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer US 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4744258/
https://www.ncbi.nlm.nih.gov/pubmed/26893595
http://dx.doi.org/10.1007/s11306-016-0967-z
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author Schock, Tracey B.
Strickland, Sheri
Steele, Edna J.
Bearden, Daniel W.
author_facet Schock, Tracey B.
Strickland, Sheri
Steele, Edna J.
Bearden, Daniel W.
author_sort Schock, Tracey B.
collection PubMed
description Environmental metabolomics studies employing earthworms as sentinels for soil contamination are numerous, but the instability of the metabolite extracts from these organisms has been minimally addressed. This study evaluated the efficacy of adding a heat-treatment step in two commonly used extraction protocols (Bligh and Dyer and D(2)O phosphate buffer) as a pre-analytical stabilization method. The resulting metabolic profiles of Eisenia fetida were assessed using principal component analysis and NMR spectral evaluations. The heated Bligh and Dyer extractions produced stabilized profiles with minimal variation of the extracted metabolomic profiles over time, providing a more suitable method for metabolomic analysis of earthworm extracts. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11306-016-0967-z) contains supplementary material, which is available to authorized users.
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spelling pubmed-47442582016-02-16 Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida Schock, Tracey B. Strickland, Sheri Steele, Edna J. Bearden, Daniel W. Metabolomics Short Communication Environmental metabolomics studies employing earthworms as sentinels for soil contamination are numerous, but the instability of the metabolite extracts from these organisms has been minimally addressed. This study evaluated the efficacy of adding a heat-treatment step in two commonly used extraction protocols (Bligh and Dyer and D(2)O phosphate buffer) as a pre-analytical stabilization method. The resulting metabolic profiles of Eisenia fetida were assessed using principal component analysis and NMR spectral evaluations. The heated Bligh and Dyer extractions produced stabilized profiles with minimal variation of the extracted metabolomic profiles over time, providing a more suitable method for metabolomic analysis of earthworm extracts. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1007/s11306-016-0967-z) contains supplementary material, which is available to authorized users. Springer US 2016-02-05 2016 /pmc/articles/PMC4744258/ /pubmed/26893595 http://dx.doi.org/10.1007/s11306-016-0967-z Text en © The Author(s) 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Short Communication
Schock, Tracey B.
Strickland, Sheri
Steele, Edna J.
Bearden, Daniel W.
Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title_full Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title_fullStr Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title_full_unstemmed Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title_short Effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm Eisenia fetida
title_sort effects of heat-treatment on the stability and composition of metabolomic extracts from the earthworm eisenia fetida
topic Short Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4744258/
https://www.ncbi.nlm.nih.gov/pubmed/26893595
http://dx.doi.org/10.1007/s11306-016-0967-z
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