Cargando…

Noise Reduction in Complex Biological Switches

Cells operate in noisy molecular environments via complex regulatory networks. It is possible to understand how molecular counts are related to noise in specific networks, but it is not generally clear how noise relates to network complexity, because different levels of complexity also imply differe...

Descripción completa

Detalles Bibliográficos
Autores principales: Cardelli, Luca, Csikász-Nagy, Attila, Dalchau, Neil, Tribastone, Mirco, Tschaikowski, Max
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4745012/
https://www.ncbi.nlm.nih.gov/pubmed/26853830
http://dx.doi.org/10.1038/srep20214
_version_ 1782414564641472512
author Cardelli, Luca
Csikász-Nagy, Attila
Dalchau, Neil
Tribastone, Mirco
Tschaikowski, Max
author_facet Cardelli, Luca
Csikász-Nagy, Attila
Dalchau, Neil
Tribastone, Mirco
Tschaikowski, Max
author_sort Cardelli, Luca
collection PubMed
description Cells operate in noisy molecular environments via complex regulatory networks. It is possible to understand how molecular counts are related to noise in specific networks, but it is not generally clear how noise relates to network complexity, because different levels of complexity also imply different overall number of molecules. For a fixed function, does increased network complexity reduce noise, beyond the mere increase of overall molecular counts? If so, complexity could provide an advantage counteracting the costs involved in maintaining larger networks. For that purpose, we investigate how noise affects multistable systems, where a small amount of noise could lead to very different outcomes; thus we turn to biochemical switches. Our method for comparing networks of different structure and complexity is to place them in conditions where they produce exactly the same deterministic function. We are then in a good position to compare their noise characteristics relatively to their identical deterministic traces. We show that more complex networks are better at coping with both intrinsic and extrinsic noise. Intrinsic noise tends to decrease with complexity, and extrinsic noise tends to have less impact. Our findings suggest a new role for increased complexity in biological networks, at parity of function.
format Online
Article
Text
id pubmed-4745012
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-47450122016-02-16 Noise Reduction in Complex Biological Switches Cardelli, Luca Csikász-Nagy, Attila Dalchau, Neil Tribastone, Mirco Tschaikowski, Max Sci Rep Article Cells operate in noisy molecular environments via complex regulatory networks. It is possible to understand how molecular counts are related to noise in specific networks, but it is not generally clear how noise relates to network complexity, because different levels of complexity also imply different overall number of molecules. For a fixed function, does increased network complexity reduce noise, beyond the mere increase of overall molecular counts? If so, complexity could provide an advantage counteracting the costs involved in maintaining larger networks. For that purpose, we investigate how noise affects multistable systems, where a small amount of noise could lead to very different outcomes; thus we turn to biochemical switches. Our method for comparing networks of different structure and complexity is to place them in conditions where they produce exactly the same deterministic function. We are then in a good position to compare their noise characteristics relatively to their identical deterministic traces. We show that more complex networks are better at coping with both intrinsic and extrinsic noise. Intrinsic noise tends to decrease with complexity, and extrinsic noise tends to have less impact. Our findings suggest a new role for increased complexity in biological networks, at parity of function. Nature Publishing Group 2016-02-08 /pmc/articles/PMC4745012/ /pubmed/26853830 http://dx.doi.org/10.1038/srep20214 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Cardelli, Luca
Csikász-Nagy, Attila
Dalchau, Neil
Tribastone, Mirco
Tschaikowski, Max
Noise Reduction in Complex Biological Switches
title Noise Reduction in Complex Biological Switches
title_full Noise Reduction in Complex Biological Switches
title_fullStr Noise Reduction in Complex Biological Switches
title_full_unstemmed Noise Reduction in Complex Biological Switches
title_short Noise Reduction in Complex Biological Switches
title_sort noise reduction in complex biological switches
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4745012/
https://www.ncbi.nlm.nih.gov/pubmed/26853830
http://dx.doi.org/10.1038/srep20214
work_keys_str_mv AT cardelliluca noisereductionincomplexbiologicalswitches
AT csikasznagyattila noisereductionincomplexbiologicalswitches
AT dalchauneil noisereductionincomplexbiologicalswitches
AT tribastonemirco noisereductionincomplexbiologicalswitches
AT tschaikowskimax noisereductionincomplexbiologicalswitches