Cargando…
Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance
Salinity-affected and heavy metal-contaminated soils limit the growth of glycophytic plants. Identifying genes responsible for superior tolerance to salinity and heavy metals in halophytes has great potential for use in developing salinity- and Cd-tolerant glycophytes. The objective of this study wa...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746305/ https://www.ncbi.nlm.nih.gov/pubmed/26904068 http://dx.doi.org/10.3389/fpls.2016.00102 |
_version_ | 1782414791107674112 |
---|---|
author | Chen, Yu Chen, Chuanming Tan, Zhiqun Liu, Jun Zhuang, Lili Yang, Zhimin Huang, Bingru |
author_facet | Chen, Yu Chen, Chuanming Tan, Zhiqun Liu, Jun Zhuang, Lili Yang, Zhimin Huang, Bingru |
author_sort | Chen, Yu |
collection | PubMed |
description | Salinity-affected and heavy metal-contaminated soils limit the growth of glycophytic plants. Identifying genes responsible for superior tolerance to salinity and heavy metals in halophytes has great potential for use in developing salinity- and Cd-tolerant glycophytes. The objective of this study was to identify salinity- and Cd-tolerance related genes in seashore paspalum (Paspalum vaginatum), a halophytic perennial grass species, using yeast cDNA expression library screening method. Based on the Gateway-compatible vector system, a high-quality entry library was constructed, which contained 9.9 × 10(6) clones with an average inserted fragment length of 1.48 kb representing a 100% full-length rate. The yeast expression libraries were screened in a salinity-sensitive and a Cd-sensitive yeast mutant. The screening yielded 32 salinity-tolerant clones harboring 18 salinity-tolerance genes and 20 Cd-tolerant clones, including five Cd-tolerance genes. qPCR analysis confirmed that most of the 18 salinity-tolerance and five Cd-tolerance genes were up-regulated at the transcript level in response to salinity or Cd stress in seashore paspalum. Functional analysis indicated that salinity-tolerance genes from seashore paspalum could be involved mainly in photosynthetic metabolism, antioxidant systems, protein modification, iron transport, vesicle traffic, and phospholipid biosynthesis. Cd-tolerance genes could be associated with regulating pathways that are involved in phytochelatin synthesis, HSFA4-related stress protection, CYP450 complex, and sugar metabolism. The 18 salinity-tolerance genes and five Cd-tolerance genes could be potentially used as candidate genes for genetic modification of glycophytic grass species to improve salinity and Cd tolerance and for further analysis of molecular mechanisms regulating salinity and Cd tolerance. |
format | Online Article Text |
id | pubmed-4746305 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-47463052016-02-22 Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance Chen, Yu Chen, Chuanming Tan, Zhiqun Liu, Jun Zhuang, Lili Yang, Zhimin Huang, Bingru Front Plant Sci Plant Science Salinity-affected and heavy metal-contaminated soils limit the growth of glycophytic plants. Identifying genes responsible for superior tolerance to salinity and heavy metals in halophytes has great potential for use in developing salinity- and Cd-tolerant glycophytes. The objective of this study was to identify salinity- and Cd-tolerance related genes in seashore paspalum (Paspalum vaginatum), a halophytic perennial grass species, using yeast cDNA expression library screening method. Based on the Gateway-compatible vector system, a high-quality entry library was constructed, which contained 9.9 × 10(6) clones with an average inserted fragment length of 1.48 kb representing a 100% full-length rate. The yeast expression libraries were screened in a salinity-sensitive and a Cd-sensitive yeast mutant. The screening yielded 32 salinity-tolerant clones harboring 18 salinity-tolerance genes and 20 Cd-tolerant clones, including five Cd-tolerance genes. qPCR analysis confirmed that most of the 18 salinity-tolerance and five Cd-tolerance genes were up-regulated at the transcript level in response to salinity or Cd stress in seashore paspalum. Functional analysis indicated that salinity-tolerance genes from seashore paspalum could be involved mainly in photosynthetic metabolism, antioxidant systems, protein modification, iron transport, vesicle traffic, and phospholipid biosynthesis. Cd-tolerance genes could be associated with regulating pathways that are involved in phytochelatin synthesis, HSFA4-related stress protection, CYP450 complex, and sugar metabolism. The 18 salinity-tolerance genes and five Cd-tolerance genes could be potentially used as candidate genes for genetic modification of glycophytic grass species to improve salinity and Cd tolerance and for further analysis of molecular mechanisms regulating salinity and Cd tolerance. Frontiers Media S.A. 2016-02-09 /pmc/articles/PMC4746305/ /pubmed/26904068 http://dx.doi.org/10.3389/fpls.2016.00102 Text en Copyright © 2016 Chen, Chen, Tan, Liu, Zhuang, Yang and Huang. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Chen, Yu Chen, Chuanming Tan, Zhiqun Liu, Jun Zhuang, Lili Yang, Zhimin Huang, Bingru Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title | Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title_full | Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title_fullStr | Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title_full_unstemmed | Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title_short | Functional Identification and Characterization of Genes Cloned from Halophyte Seashore Paspalum Conferring Salinity and Cadmium Tolerance |
title_sort | functional identification and characterization of genes cloned from halophyte seashore paspalum conferring salinity and cadmium tolerance |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746305/ https://www.ncbi.nlm.nih.gov/pubmed/26904068 http://dx.doi.org/10.3389/fpls.2016.00102 |
work_keys_str_mv | AT chenyu functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT chenchuanming functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT tanzhiqun functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT liujun functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT zhuanglili functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT yangzhimin functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance AT huangbingru functionalidentificationandcharacterizationofgenesclonedfromhalophyteseashorepaspalumconferringsalinityandcadmiumtolerance |