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Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity

Inherited retinal disease (IRD) is a category of genetic disorders affecting retina. Understanding the molecular basis of IRD is vital for clinical and genetic classification of patients. Uyghur people is an isolated ethnic group mainly residing in northwestern China with genetic admixture from Euro...

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Autores principales: Tajiguli, Abulikemu, Xu, Mingchu, Fu, Qing, Yiming, Rouzimaimaiti, Wang, Keqing, Li, Yumei, Eblimit, Aiden, Sui, Ruifang, Chen, Rui, Aisa, Haji Akber
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746660/
https://www.ncbi.nlm.nih.gov/pubmed/26856745
http://dx.doi.org/10.1038/srep21384
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author Tajiguli, Abulikemu
Xu, Mingchu
Fu, Qing
Yiming, Rouzimaimaiti
Wang, Keqing
Li, Yumei
Eblimit, Aiden
Sui, Ruifang
Chen, Rui
Aisa, Haji Akber
author_facet Tajiguli, Abulikemu
Xu, Mingchu
Fu, Qing
Yiming, Rouzimaimaiti
Wang, Keqing
Li, Yumei
Eblimit, Aiden
Sui, Ruifang
Chen, Rui
Aisa, Haji Akber
author_sort Tajiguli, Abulikemu
collection PubMed
description Inherited retinal disease (IRD) is a category of genetic disorders affecting retina. Understanding the molecular basis of IRD is vital for clinical and genetic classification of patients. Uyghur people is an isolated ethnic group mainly residing in northwestern China with genetic admixture from Europeans and East Asians. The genetic etiology of IRD in this specific population still remains unknown. Here, by next-generation sequencing (NGS), we screened mutations in over 200 known retinal disease genes in a cohort of 12 unrelated Uyghur IRD probands. Out of the 12 probands, six are solved with high confidence, two with low confidence, while the remaining four are unsolved. We identified known disease-causing alleles in this cohort that suggest ancient Uyghur migration and also discovered eight novel disease-associated variants. Our results showed NGS-based mutation screening as a reliable approach for molecular diagnosis. In addition, this approach can also be applied to reveal the genetic history of a specific ethnic group.
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spelling pubmed-47466602016-02-17 Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity Tajiguli, Abulikemu Xu, Mingchu Fu, Qing Yiming, Rouzimaimaiti Wang, Keqing Li, Yumei Eblimit, Aiden Sui, Ruifang Chen, Rui Aisa, Haji Akber Sci Rep Article Inherited retinal disease (IRD) is a category of genetic disorders affecting retina. Understanding the molecular basis of IRD is vital for clinical and genetic classification of patients. Uyghur people is an isolated ethnic group mainly residing in northwestern China with genetic admixture from Europeans and East Asians. The genetic etiology of IRD in this specific population still remains unknown. Here, by next-generation sequencing (NGS), we screened mutations in over 200 known retinal disease genes in a cohort of 12 unrelated Uyghur IRD probands. Out of the 12 probands, six are solved with high confidence, two with low confidence, while the remaining four are unsolved. We identified known disease-causing alleles in this cohort that suggest ancient Uyghur migration and also discovered eight novel disease-associated variants. Our results showed NGS-based mutation screening as a reliable approach for molecular diagnosis. In addition, this approach can also be applied to reveal the genetic history of a specific ethnic group. Nature Publishing Group 2016-02-09 /pmc/articles/PMC4746660/ /pubmed/26856745 http://dx.doi.org/10.1038/srep21384 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Tajiguli, Abulikemu
Xu, Mingchu
Fu, Qing
Yiming, Rouzimaimaiti
Wang, Keqing
Li, Yumei
Eblimit, Aiden
Sui, Ruifang
Chen, Rui
Aisa, Haji Akber
Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title_full Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title_fullStr Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title_full_unstemmed Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title_short Next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of Uyghur ethnicity
title_sort next-generation sequencing-based molecular diagnosis of 12 inherited retinal disease probands of uyghur ethnicity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746660/
https://www.ncbi.nlm.nih.gov/pubmed/26856745
http://dx.doi.org/10.1038/srep21384
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