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Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations

Predictions of patient outcomes after a given therapy are fundamental to medical practice. We employ a machine learning approach towards predicting the outcomes after stereotactic radiosurgery for cerebral arteriovenous malformations (AVMs). Using three prospective databases, a machine learning appr...

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Autores principales: Oermann, Eric Karl, Rubinsteyn, Alex, Ding, Dale, Mascitelli, Justin, Starke, Robert M., Bederson, Joshua B., Kano, Hideyuki, Lunsford, L. Dade, Sheehan, Jason P., Hammerbacher, Jeffrey, Kondziolka, Douglas
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746661/
https://www.ncbi.nlm.nih.gov/pubmed/26856372
http://dx.doi.org/10.1038/srep21161
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author Oermann, Eric Karl
Rubinsteyn, Alex
Ding, Dale
Mascitelli, Justin
Starke, Robert M.
Bederson, Joshua B.
Kano, Hideyuki
Lunsford, L. Dade
Sheehan, Jason P.
Hammerbacher, Jeffrey
Kondziolka, Douglas
author_facet Oermann, Eric Karl
Rubinsteyn, Alex
Ding, Dale
Mascitelli, Justin
Starke, Robert M.
Bederson, Joshua B.
Kano, Hideyuki
Lunsford, L. Dade
Sheehan, Jason P.
Hammerbacher, Jeffrey
Kondziolka, Douglas
author_sort Oermann, Eric Karl
collection PubMed
description Predictions of patient outcomes after a given therapy are fundamental to medical practice. We employ a machine learning approach towards predicting the outcomes after stereotactic radiosurgery for cerebral arteriovenous malformations (AVMs). Using three prospective databases, a machine learning approach of feature engineering and model optimization was implemented to create the most accurate predictor of AVM outcomes. Existing prognostic systems were scored for purposes of comparison. The final predictor was secondarily validated on an independent site’s dataset not utilized for initial construction. Out of 1,810 patients, 1,674 to 1,291 patients depending upon time threshold, with 23 features were included for analysis and divided into training and validation sets. The best predictor had an average area under the curve (AUC) of 0.71 compared to existing clinical systems of 0.63 across all time points. On the heldout dataset, the predictor had an accuracy of around 0.74 at across all time thresholds with a specificity and sensitivity of 62% and 85% respectively. This machine learning approach was able to provide the best possible predictions of AVM radiosurgery outcomes of any method to date, identify a novel radiobiological feature (3D surface dose), and demonstrate a paradigm for further development of prognostic tools in medical care.
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spelling pubmed-47466612016-02-17 Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations Oermann, Eric Karl Rubinsteyn, Alex Ding, Dale Mascitelli, Justin Starke, Robert M. Bederson, Joshua B. Kano, Hideyuki Lunsford, L. Dade Sheehan, Jason P. Hammerbacher, Jeffrey Kondziolka, Douglas Sci Rep Article Predictions of patient outcomes after a given therapy are fundamental to medical practice. We employ a machine learning approach towards predicting the outcomes after stereotactic radiosurgery for cerebral arteriovenous malformations (AVMs). Using three prospective databases, a machine learning approach of feature engineering and model optimization was implemented to create the most accurate predictor of AVM outcomes. Existing prognostic systems were scored for purposes of comparison. The final predictor was secondarily validated on an independent site’s dataset not utilized for initial construction. Out of 1,810 patients, 1,674 to 1,291 patients depending upon time threshold, with 23 features were included for analysis and divided into training and validation sets. The best predictor had an average area under the curve (AUC) of 0.71 compared to existing clinical systems of 0.63 across all time points. On the heldout dataset, the predictor had an accuracy of around 0.74 at across all time thresholds with a specificity and sensitivity of 62% and 85% respectively. This machine learning approach was able to provide the best possible predictions of AVM radiosurgery outcomes of any method to date, identify a novel radiobiological feature (3D surface dose), and demonstrate a paradigm for further development of prognostic tools in medical care. Nature Publishing Group 2016-02-09 /pmc/articles/PMC4746661/ /pubmed/26856372 http://dx.doi.org/10.1038/srep21161 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Oermann, Eric Karl
Rubinsteyn, Alex
Ding, Dale
Mascitelli, Justin
Starke, Robert M.
Bederson, Joshua B.
Kano, Hideyuki
Lunsford, L. Dade
Sheehan, Jason P.
Hammerbacher, Jeffrey
Kondziolka, Douglas
Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title_full Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title_fullStr Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title_full_unstemmed Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title_short Using a Machine Learning Approach to Predict Outcomes after Radiosurgery for Cerebral Arteriovenous Malformations
title_sort using a machine learning approach to predict outcomes after radiosurgery for cerebral arteriovenous malformations
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4746661/
https://www.ncbi.nlm.nih.gov/pubmed/26856372
http://dx.doi.org/10.1038/srep21161
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