Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae

Xanthomonas oryzae pv. oryzae is the etiological agent of bacterial rice blight. Three distinct clades of X. oryzae pv. oryzae are known. We present the complete annotated genome of the African clade strain AXO194 using long-read single-molecule PacBio sequencing technology. The genome comprises a s...

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Autores principales: Huguet-Tapia, J. C., Peng, Z., Yang, B., Yin, Z., Liu, S., White, F. F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2016
Materias:
Prokaryotes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4751330/
https://www.ncbi.nlm.nih.gov/pubmed/26868406
http://dx.doi.org/10.1128/genomeA.01730-15
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author Huguet-Tapia, J. C.
Peng, Z.
Yang, B.
Yin, Z.
Liu, S.
White, F. F.
author_facet Huguet-Tapia, J. C.
Peng, Z.
Yang, B.
Yin, Z.
Liu, S.
White, F. F.
author_sort Huguet-Tapia, J. C.
collection PubMed
description Xanthomonas oryzae pv. oryzae is the etiological agent of bacterial rice blight. Three distinct clades of X. oryzae pv. oryzae are known. We present the complete annotated genome of the African clade strain AXO194 using long-read single-molecule PacBio sequencing technology. The genome comprises a single chromosome of 4,674,975 bp and encodes for nine transcriptional activator-like (TAL) effectors. The approach and data presented in this announcement provide information for complex bacterial genome organization and the discovery of new virulence effectors, and they facilitate target characterization of TAL effectors.
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spelling pubmed-47513302016-02-12 Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae Huguet-Tapia, J. C. Peng, Z. Yang, B. Yin, Z. Liu, S. White, F. F. Genome Announc Prokaryotes Xanthomonas oryzae pv. oryzae is the etiological agent of bacterial rice blight. Three distinct clades of X. oryzae pv. oryzae are known. We present the complete annotated genome of the African clade strain AXO194 using long-read single-molecule PacBio sequencing technology. The genome comprises a single chromosome of 4,674,975 bp and encodes for nine transcriptional activator-like (TAL) effectors. The approach and data presented in this announcement provide information for complex bacterial genome organization and the discovery of new virulence effectors, and they facilitate target characterization of TAL effectors. American Society for Microbiology 2016-02-11 /pmc/articles/PMC4751330/ /pubmed/26868406 http://dx.doi.org/10.1128/genomeA.01730-15 Text en Copyright © 2016 Huguet-Tapia et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Prokaryotes
Huguet-Tapia, J. C.
Peng, Z.
Yang, B.
Yin, Z.
Liu, S.
White, F. F.
Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title_full Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title_fullStr Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title_full_unstemmed Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title_short Complete Genome Sequence of the African Strain AXO1947 of Xanthomonas oryzae pv. oryzae
title_sort complete genome sequence of the african strain axo1947 of xanthomonas oryzae pv. oryzae
topic Prokaryotes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4751330/
https://www.ncbi.nlm.nih.gov/pubmed/26868406
http://dx.doi.org/10.1128/genomeA.01730-15
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