Cargando…

A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics

The ability to make rapid diagnosis of infectious diseases broadly available in a portable, low-cost format would mark a great step forward in global health. Many molecular diagnostic assays are developed based on using thermal cyclers to carry out polymerase chain reaction (PCR) and reverse-transcr...

Descripción completa

Detalles Bibliográficos
Autores principales: Chan, Kamfai, Wong, Pui-Yan, Yu, Peter, Hardick, Justin, Wong, Kah-Yat, Wilson, Scott A., Wu, Tiffany, Hui, Zoe, Gaydos, Charlotte, Wong, Season S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4752298/
https://www.ncbi.nlm.nih.gov/pubmed/26872358
http://dx.doi.org/10.1371/journal.pone.0149150
_version_ 1782415707549466624
author Chan, Kamfai
Wong, Pui-Yan
Yu, Peter
Hardick, Justin
Wong, Kah-Yat
Wilson, Scott A.
Wu, Tiffany
Hui, Zoe
Gaydos, Charlotte
Wong, Season S.
author_facet Chan, Kamfai
Wong, Pui-Yan
Yu, Peter
Hardick, Justin
Wong, Kah-Yat
Wilson, Scott A.
Wu, Tiffany
Hui, Zoe
Gaydos, Charlotte
Wong, Season S.
author_sort Chan, Kamfai
collection PubMed
description The ability to make rapid diagnosis of infectious diseases broadly available in a portable, low-cost format would mark a great step forward in global health. Many molecular diagnostic assays are developed based on using thermal cyclers to carry out polymerase chain reaction (PCR) and reverse-transcription PCR for DNA and RNA amplification and detection, respectively. Unfortunately, most commercial thermal cyclers are expensive and need continuous electrical power supply, so they are not suitable for uses in low-resource settings. We have previously reported a low-cost and simple approach to amplify DNA using vacuum insulated stainless steel thermoses food cans, which we have named it thermos thermal cycler or TTC. Here, we describe the use of an improved set up to enable the detection of viral RNA targets by reverse-transcription PCR (RT-PCR), thus expanding the TTC’s ability to identify highly infectious, RNA virus-based diseases in low resource settings. The TTC was successful in demonstrating high-speed and sensitive detection of DNA or RNA targets of sexually transmitted diseases, HIV/AIDS, Ebola hemorrhagic fever, and dengue fever. Our innovative TTC costs less than $200 to build and has a capacity of at least eight tubes. In terms of speed, the TTC’s performance exceeded that of commercial thermal cyclers tested. When coupled with low-cost endpoint detection technologies such as nucleic acid lateral-flow assay or a cell-phone-based fluorescence detector, the TTC will increase the availability of on-site molecular diagnostics in low-resource settings.
format Online
Article
Text
id pubmed-4752298
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-47522982016-02-26 A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics Chan, Kamfai Wong, Pui-Yan Yu, Peter Hardick, Justin Wong, Kah-Yat Wilson, Scott A. Wu, Tiffany Hui, Zoe Gaydos, Charlotte Wong, Season S. PLoS One Research Article The ability to make rapid diagnosis of infectious diseases broadly available in a portable, low-cost format would mark a great step forward in global health. Many molecular diagnostic assays are developed based on using thermal cyclers to carry out polymerase chain reaction (PCR) and reverse-transcription PCR for DNA and RNA amplification and detection, respectively. Unfortunately, most commercial thermal cyclers are expensive and need continuous electrical power supply, so they are not suitable for uses in low-resource settings. We have previously reported a low-cost and simple approach to amplify DNA using vacuum insulated stainless steel thermoses food cans, which we have named it thermos thermal cycler or TTC. Here, we describe the use of an improved set up to enable the detection of viral RNA targets by reverse-transcription PCR (RT-PCR), thus expanding the TTC’s ability to identify highly infectious, RNA virus-based diseases in low resource settings. The TTC was successful in demonstrating high-speed and sensitive detection of DNA or RNA targets of sexually transmitted diseases, HIV/AIDS, Ebola hemorrhagic fever, and dengue fever. Our innovative TTC costs less than $200 to build and has a capacity of at least eight tubes. In terms of speed, the TTC’s performance exceeded that of commercial thermal cyclers tested. When coupled with low-cost endpoint detection technologies such as nucleic acid lateral-flow assay or a cell-phone-based fluorescence detector, the TTC will increase the availability of on-site molecular diagnostics in low-resource settings. Public Library of Science 2016-02-12 /pmc/articles/PMC4752298/ /pubmed/26872358 http://dx.doi.org/10.1371/journal.pone.0149150 Text en © 2016 Chan et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Chan, Kamfai
Wong, Pui-Yan
Yu, Peter
Hardick, Justin
Wong, Kah-Yat
Wilson, Scott A.
Wu, Tiffany
Hui, Zoe
Gaydos, Charlotte
Wong, Season S.
A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title_full A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title_fullStr A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title_full_unstemmed A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title_short A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics
title_sort rapid and low-cost pcr thermal cycler for infectious disease diagnostics
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4752298/
https://www.ncbi.nlm.nih.gov/pubmed/26872358
http://dx.doi.org/10.1371/journal.pone.0149150
work_keys_str_mv AT chankamfai arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongpuiyan arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT yupeter arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT hardickjustin arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongkahyat arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wilsonscotta arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wutiffany arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT huizoe arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT gaydoscharlotte arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongseasons arapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT chankamfai rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongpuiyan rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT yupeter rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT hardickjustin rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongkahyat rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wilsonscotta rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wutiffany rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT huizoe rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT gaydoscharlotte rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics
AT wongseasons rapidandlowcostpcrthermalcyclerforinfectiousdiseasediagnostics