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A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities
BACKGROUND: Cellulose, an abundant and renewable polysaccharides, constitutes the largest resource for bioconversion of biofuels. Plant polysaccharides hydrolysis is catalyzed by cellulases, which include endoglucanases, exoglucanases, and β-glucosidases. Converting cellulose and hemicellulose to sh...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4752780/ https://www.ncbi.nlm.nih.gov/pubmed/26877766 http://dx.doi.org/10.1186/s13068-016-0449-6 |
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author | Zhou, Yu Wang, Xu Wei, Wei Xu, Jimin Wang, Wei Xie, Zhongwen Zhang, Zhengzhu Jiang, Hongchen Wang, Qi Wei, Chaoling |
author_facet | Zhou, Yu Wang, Xu Wei, Wei Xu, Jimin Wang, Wei Xie, Zhongwen Zhang, Zhengzhu Jiang, Hongchen Wang, Qi Wei, Chaoling |
author_sort | Zhou, Yu |
collection | PubMed |
description | BACKGROUND: Cellulose, an abundant and renewable polysaccharides, constitutes the largest resource for bioconversion of biofuels. Plant polysaccharides hydrolysis is catalyzed by cellulases, which include endoglucanases, exoglucanases, and β-glucosidases. Converting cellulose and hemicellulose to short chains of oligosaccharides by endo-/exoglucanases is the key step for biofuel transformation. Intriguingly, β-glucanases with transglycosylation activity not only can relieve product inhibition of glucan hydrolysis but also has potential application as biocatalysts for functional materials. RESULTS: Here, a metagenomic fosmid library was constructed from a paddy soil for cellulase screening. One purified clone showing carboxymethylcellulase activity was isolated, and the complete β-glucanase gene (umcel9y-1) was cloned and overexpressed in Escherichia coli. Phylogenetic analysis indicated that β-glucanase Umcel9y-1 belonged to the theme C of glycoside hydrolase family 9. Amino acids sequence showed 58.4 % similarity between Umcel9y-1 and its closest characterized reference, cellulase Cel01. Biological characterization showed that Umcel9y-1 was an efficient endoglucanase and also exhibited high activities of exoglucanase and transglycosylation. The transglycosylation products of Umcel9y-1 including sophorose, laminaribiose, and gentiobiose, and transglycosylation was detected under all activated conditions. The order of catalytic efficiency for polysaccharides, cellooligosaccharides, and aryl-β-glycosides was p-nitrophenol-D-cellobioside, barley glucan, cellopentaose, cellotetraose, cellotriose, hydroxyethylcellulose, cellohexose, laminarin, and carboxymethylcellulose, respectively. The barley glucan was the optimal polysaccharides for Umcel9y-1 with K(m) and K(cat)/K(m) values of 13.700 mM and 239.152 s(−1) mM(−1), respectively. CONCLUSION: Biological characterizations of recombinant Umcel9y-1 showed that the versatile β-glucanase had efficient endoglucanase activity to barley glucan and also exhibited high activities of exoglucanase and transglycosylation. The optimum conditions of recombinant Umcel9y-1 was pH 6.5–7.0 at 37 °C with predominant halotolerance and high-thermal stability. These results indicate that the novel metagenomic-derived β-glucanase may be a potent candidate for industrial applications. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-016-0449-6) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-4752780 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-47527802016-02-14 A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities Zhou, Yu Wang, Xu Wei, Wei Xu, Jimin Wang, Wei Xie, Zhongwen Zhang, Zhengzhu Jiang, Hongchen Wang, Qi Wei, Chaoling Biotechnol Biofuels Research BACKGROUND: Cellulose, an abundant and renewable polysaccharides, constitutes the largest resource for bioconversion of biofuels. Plant polysaccharides hydrolysis is catalyzed by cellulases, which include endoglucanases, exoglucanases, and β-glucosidases. Converting cellulose and hemicellulose to short chains of oligosaccharides by endo-/exoglucanases is the key step for biofuel transformation. Intriguingly, β-glucanases with transglycosylation activity not only can relieve product inhibition of glucan hydrolysis but also has potential application as biocatalysts for functional materials. RESULTS: Here, a metagenomic fosmid library was constructed from a paddy soil for cellulase screening. One purified clone showing carboxymethylcellulase activity was isolated, and the complete β-glucanase gene (umcel9y-1) was cloned and overexpressed in Escherichia coli. Phylogenetic analysis indicated that β-glucanase Umcel9y-1 belonged to the theme C of glycoside hydrolase family 9. Amino acids sequence showed 58.4 % similarity between Umcel9y-1 and its closest characterized reference, cellulase Cel01. Biological characterization showed that Umcel9y-1 was an efficient endoglucanase and also exhibited high activities of exoglucanase and transglycosylation. The transglycosylation products of Umcel9y-1 including sophorose, laminaribiose, and gentiobiose, and transglycosylation was detected under all activated conditions. The order of catalytic efficiency for polysaccharides, cellooligosaccharides, and aryl-β-glycosides was p-nitrophenol-D-cellobioside, barley glucan, cellopentaose, cellotetraose, cellotriose, hydroxyethylcellulose, cellohexose, laminarin, and carboxymethylcellulose, respectively. The barley glucan was the optimal polysaccharides for Umcel9y-1 with K(m) and K(cat)/K(m) values of 13.700 mM and 239.152 s(−1) mM(−1), respectively. CONCLUSION: Biological characterizations of recombinant Umcel9y-1 showed that the versatile β-glucanase had efficient endoglucanase activity to barley glucan and also exhibited high activities of exoglucanase and transglycosylation. The optimum conditions of recombinant Umcel9y-1 was pH 6.5–7.0 at 37 °C with predominant halotolerance and high-thermal stability. These results indicate that the novel metagenomic-derived β-glucanase may be a potent candidate for industrial applications. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (doi:10.1186/s13068-016-0449-6) contains supplementary material, which is available to authorized users. BioMed Central 2016-02-13 /pmc/articles/PMC4752780/ /pubmed/26877766 http://dx.doi.org/10.1186/s13068-016-0449-6 Text en © Zhou et al. 2016 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Zhou, Yu Wang, Xu Wei, Wei Xu, Jimin Wang, Wei Xie, Zhongwen Zhang, Zhengzhu Jiang, Hongchen Wang, Qi Wei, Chaoling A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title | A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title_full | A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title_fullStr | A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title_full_unstemmed | A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title_short | A novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
title_sort | novel efficient β-glucanase from a paddy soil microbial metagenome with versatile activities |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4752780/ https://www.ncbi.nlm.nih.gov/pubmed/26877766 http://dx.doi.org/10.1186/s13068-016-0449-6 |
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