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Visualizing the orientational dependence of an intermolecular potential

Scanning probe microscopy can now be used to map the properties of single molecules with intramolecular precision by functionalization of the apex of the scanning probe tip with a single atom or molecule. Here we report on the mapping of the three-dimensional potential between fullerene (C(60)) mole...

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Autores principales: Sweetman, Adam, Rashid, Mohammad A., Jarvis, Samuel P., Dunn, Janette L., Rahe, Philipp, Moriarty, Philip
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4757755/
https://www.ncbi.nlm.nih.gov/pubmed/26879386
http://dx.doi.org/10.1038/ncomms10621
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author Sweetman, Adam
Rashid, Mohammad A.
Jarvis, Samuel P.
Dunn, Janette L.
Rahe, Philipp
Moriarty, Philip
author_facet Sweetman, Adam
Rashid, Mohammad A.
Jarvis, Samuel P.
Dunn, Janette L.
Rahe, Philipp
Moriarty, Philip
author_sort Sweetman, Adam
collection PubMed
description Scanning probe microscopy can now be used to map the properties of single molecules with intramolecular precision by functionalization of the apex of the scanning probe tip with a single atom or molecule. Here we report on the mapping of the three-dimensional potential between fullerene (C(60)) molecules in different relative orientations, with sub-Angstrom resolution, using dynamic force microscopy (DFM). We introduce a visualization method which is capable of directly imaging the variation in equilibrium binding energy of different molecular orientations. We model the interaction using both a simple approach based around analytical Lennard–Jones potentials, and with dispersion-force-corrected density functional theory (DFT), and show that the positional variation in the binding energy between the molecules is dominated by the onset of repulsive interactions. Our modelling suggests that variations in the dispersion interaction are masked by repulsive interactions even at displacements significantly larger than the equilibrium intermolecular separation.
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spelling pubmed-47577552016-03-04 Visualizing the orientational dependence of an intermolecular potential Sweetman, Adam Rashid, Mohammad A. Jarvis, Samuel P. Dunn, Janette L. Rahe, Philipp Moriarty, Philip Nat Commun Article Scanning probe microscopy can now be used to map the properties of single molecules with intramolecular precision by functionalization of the apex of the scanning probe tip with a single atom or molecule. Here we report on the mapping of the three-dimensional potential between fullerene (C(60)) molecules in different relative orientations, with sub-Angstrom resolution, using dynamic force microscopy (DFM). We introduce a visualization method which is capable of directly imaging the variation in equilibrium binding energy of different molecular orientations. We model the interaction using both a simple approach based around analytical Lennard–Jones potentials, and with dispersion-force-corrected density functional theory (DFT), and show that the positional variation in the binding energy between the molecules is dominated by the onset of repulsive interactions. Our modelling suggests that variations in the dispersion interaction are masked by repulsive interactions even at displacements significantly larger than the equilibrium intermolecular separation. Nature Publishing Group 2016-02-16 /pmc/articles/PMC4757755/ /pubmed/26879386 http://dx.doi.org/10.1038/ncomms10621 Text en Copyright © 2016, Nature Publishing Group, a division of Macmillan Publishers Limited. All Rights Reserved. http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Sweetman, Adam
Rashid, Mohammad A.
Jarvis, Samuel P.
Dunn, Janette L.
Rahe, Philipp
Moriarty, Philip
Visualizing the orientational dependence of an intermolecular potential
title Visualizing the orientational dependence of an intermolecular potential
title_full Visualizing the orientational dependence of an intermolecular potential
title_fullStr Visualizing the orientational dependence of an intermolecular potential
title_full_unstemmed Visualizing the orientational dependence of an intermolecular potential
title_short Visualizing the orientational dependence of an intermolecular potential
title_sort visualizing the orientational dependence of an intermolecular potential
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4757755/
https://www.ncbi.nlm.nih.gov/pubmed/26879386
http://dx.doi.org/10.1038/ncomms10621
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