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Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study

Behçet’s disease (BD) is a chronic, relapsing, multisystemic inflammatory disorder with unanswered questions regarding its etiology/pathogenesis and classification. Distinct manifestation based subsets, pronounced geographical variations in expression, and discrepant immunological abnormalities rais...

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Autores principales: Oğuz, Ali Kemal, Yılmaz, Seda Taşır, Oygür, Çağdaş Şahap, Çandar, Tuba, Sayın, Irmak, Kılıçoğlu, Sibel Serin, Ergün, İhsan, Ateş, Aşkın, Özdağ, Hilal, Akar, Nejat
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4758705/
https://www.ncbi.nlm.nih.gov/pubmed/26890122
http://dx.doi.org/10.1371/journal.pone.0149052
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author Oğuz, Ali Kemal
Yılmaz, Seda Taşır
Oygür, Çağdaş Şahap
Çandar, Tuba
Sayın, Irmak
Kılıçoğlu, Sibel Serin
Ergün, İhsan
Ateş, Aşkın
Özdağ, Hilal
Akar, Nejat
author_facet Oğuz, Ali Kemal
Yılmaz, Seda Taşır
Oygür, Çağdaş Şahap
Çandar, Tuba
Sayın, Irmak
Kılıçoğlu, Sibel Serin
Ergün, İhsan
Ateş, Aşkın
Özdağ, Hilal
Akar, Nejat
author_sort Oğuz, Ali Kemal
collection PubMed
description Behçet’s disease (BD) is a chronic, relapsing, multisystemic inflammatory disorder with unanswered questions regarding its etiology/pathogenesis and classification. Distinct manifestation based subsets, pronounced geographical variations in expression, and discrepant immunological abnormalities raised the question whether Behçet’s is “a disease or a syndrome”. To answer the preceding question we aimed to display and compare the molecular mechanisms underlying distinct subsets of BD. For this purpose, the expression data of the gene expression profiling and association study on BD by Xavier et al (2013) was retrieved from GEO database and reanalysed by gene expression data analysis/visualization and bioinformatics enrichment tools. There were 15 BD patients (B) and 14 controls (C). Three subsets of BD patients were generated: MB (isolated mucocutaneous manifestations, n = 7), OB (ocular involvement, n = 4), and VB (large vein thrombosis, n = 4). Class comparison analyses yielded the following numbers of differentially expressed genes (DEGs); B vs C: 4, MB vs C: 5, OB vs C: 151, VB vs C: 274, MB vs OB: 215, MB vs VB: 760, OB vs VB: 984. Venn diagram analysis showed that there were no common DEGs in the intersection “MB vs C” ∩ “OB vs C” ∩ “VB vs C”. Cluster analyses successfully clustered distinct expressions of BD. During gene ontology term enrichment analyses, categories with relevance to IL-8 production (MB vs C) and immune response to microorganisms (OB vs C) were differentially enriched. Distinct subsets of BD display distinct expression profiles and different disease associated pathways. Based on these clear discrepancies, the designation as “Behçet’s syndrome” (BS) should be encouraged and future research should take into consideration the immunogenetic heterogeneity of BS subsets. Four gene groups, namely, negative regulators of inflammation (CD69, CLEC12A, CLEC12B, TNFAIP3), neutrophil granule proteins (LTF, OLFM4, AZU1, MMP8, DEFA4, CAMP), antigen processing and presentation proteins (CTSS, ERAP1), and regulators of immune response (LGALS2, BCL10, ITCH, CEACAM8, CD36, IL8, CCL4, EREG, NFKBIZ, CCR2, CD180, KLRC4, NFAT5) appear to be instrumental in BS immunopathogenesis.
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spelling pubmed-47587052016-02-26 Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study Oğuz, Ali Kemal Yılmaz, Seda Taşır Oygür, Çağdaş Şahap Çandar, Tuba Sayın, Irmak Kılıçoğlu, Sibel Serin Ergün, İhsan Ateş, Aşkın Özdağ, Hilal Akar, Nejat PLoS One Research Article Behçet’s disease (BD) is a chronic, relapsing, multisystemic inflammatory disorder with unanswered questions regarding its etiology/pathogenesis and classification. Distinct manifestation based subsets, pronounced geographical variations in expression, and discrepant immunological abnormalities raised the question whether Behçet’s is “a disease or a syndrome”. To answer the preceding question we aimed to display and compare the molecular mechanisms underlying distinct subsets of BD. For this purpose, the expression data of the gene expression profiling and association study on BD by Xavier et al (2013) was retrieved from GEO database and reanalysed by gene expression data analysis/visualization and bioinformatics enrichment tools. There were 15 BD patients (B) and 14 controls (C). Three subsets of BD patients were generated: MB (isolated mucocutaneous manifestations, n = 7), OB (ocular involvement, n = 4), and VB (large vein thrombosis, n = 4). Class comparison analyses yielded the following numbers of differentially expressed genes (DEGs); B vs C: 4, MB vs C: 5, OB vs C: 151, VB vs C: 274, MB vs OB: 215, MB vs VB: 760, OB vs VB: 984. Venn diagram analysis showed that there were no common DEGs in the intersection “MB vs C” ∩ “OB vs C” ∩ “VB vs C”. Cluster analyses successfully clustered distinct expressions of BD. During gene ontology term enrichment analyses, categories with relevance to IL-8 production (MB vs C) and immune response to microorganisms (OB vs C) were differentially enriched. Distinct subsets of BD display distinct expression profiles and different disease associated pathways. Based on these clear discrepancies, the designation as “Behçet’s syndrome” (BS) should be encouraged and future research should take into consideration the immunogenetic heterogeneity of BS subsets. Four gene groups, namely, negative regulators of inflammation (CD69, CLEC12A, CLEC12B, TNFAIP3), neutrophil granule proteins (LTF, OLFM4, AZU1, MMP8, DEFA4, CAMP), antigen processing and presentation proteins (CTSS, ERAP1), and regulators of immune response (LGALS2, BCL10, ITCH, CEACAM8, CD36, IL8, CCL4, EREG, NFKBIZ, CCR2, CD180, KLRC4, NFAT5) appear to be instrumental in BS immunopathogenesis. Public Library of Science 2016-02-18 /pmc/articles/PMC4758705/ /pubmed/26890122 http://dx.doi.org/10.1371/journal.pone.0149052 Text en © 2016 Oğuz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Oğuz, Ali Kemal
Yılmaz, Seda Taşır
Oygür, Çağdaş Şahap
Çandar, Tuba
Sayın, Irmak
Kılıçoğlu, Sibel Serin
Ergün, İhsan
Ateş, Aşkın
Özdağ, Hilal
Akar, Nejat
Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title_full Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title_fullStr Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title_full_unstemmed Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title_short Behçet's: A Disease or a Syndrome? Answer from an Expression Profiling Study
title_sort behçet's: a disease or a syndrome? answer from an expression profiling study
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4758705/
https://www.ncbi.nlm.nih.gov/pubmed/26890122
http://dx.doi.org/10.1371/journal.pone.0149052
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