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Measuring the robustness of network community structure using assortativity

The existence of discrete social clusters, or ‘communities’, is a common feature of social networks in human and nonhuman animals. The level of such community structure in networks is typically measured using an index of modularity, Q. While modularity quantifies the degree to which individuals asso...

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Autores principales: Shizuka, Daizaburo, Farine, Damien R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Academic Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4758825/
https://www.ncbi.nlm.nih.gov/pubmed/26949266
http://dx.doi.org/10.1016/j.anbehav.2015.12.007
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author Shizuka, Daizaburo
Farine, Damien R.
author_facet Shizuka, Daizaburo
Farine, Damien R.
author_sort Shizuka, Daizaburo
collection PubMed
description The existence of discrete social clusters, or ‘communities’, is a common feature of social networks in human and nonhuman animals. The level of such community structure in networks is typically measured using an index of modularity, Q. While modularity quantifies the degree to which individuals associate within versus between social communities and provides a useful measure of structure in the social network, it assumes that the network has been well sampled. However, animal social network data is typically subject to sampling errors. In particular, the associations among individuals are often not sampled equally, and animal social network studies are often based on a relatively small set of observations. Here, we extend an existing framework for bootstrapping network metrics to provide a method for assessing the robustness of community assignment in social networks using a metric we call community assortativity (r(com)). We use simulations to demonstrate that modularity can reliably detect the transition from random to structured associations in networks that differ in size and number of communities, while community assortativity accurately measures the level of confidence based on the detectability of associations. We then demonstrate the use of these metrics using three publicly available data sets of avian social networks. We suggest that by explicitly addressing the known limitations in sampling animal social network, this approach will facilitate more rigorous analyses of population-level structural patterns across social systems.
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spelling pubmed-47588252016-03-04 Measuring the robustness of network community structure using assortativity Shizuka, Daizaburo Farine, Damien R. Anim Behav Article The existence of discrete social clusters, or ‘communities’, is a common feature of social networks in human and nonhuman animals. The level of such community structure in networks is typically measured using an index of modularity, Q. While modularity quantifies the degree to which individuals associate within versus between social communities and provides a useful measure of structure in the social network, it assumes that the network has been well sampled. However, animal social network data is typically subject to sampling errors. In particular, the associations among individuals are often not sampled equally, and animal social network studies are often based on a relatively small set of observations. Here, we extend an existing framework for bootstrapping network metrics to provide a method for assessing the robustness of community assignment in social networks using a metric we call community assortativity (r(com)). We use simulations to demonstrate that modularity can reliably detect the transition from random to structured associations in networks that differ in size and number of communities, while community assortativity accurately measures the level of confidence based on the detectability of associations. We then demonstrate the use of these metrics using three publicly available data sets of avian social networks. We suggest that by explicitly addressing the known limitations in sampling animal social network, this approach will facilitate more rigorous analyses of population-level structural patterns across social systems. Academic Press 2016-02 /pmc/articles/PMC4758825/ /pubmed/26949266 http://dx.doi.org/10.1016/j.anbehav.2015.12.007 Text en © 2015 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shizuka, Daizaburo
Farine, Damien R.
Measuring the robustness of network community structure using assortativity
title Measuring the robustness of network community structure using assortativity
title_full Measuring the robustness of network community structure using assortativity
title_fullStr Measuring the robustness of network community structure using assortativity
title_full_unstemmed Measuring the robustness of network community structure using assortativity
title_short Measuring the robustness of network community structure using assortativity
title_sort measuring the robustness of network community structure using assortativity
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4758825/
https://www.ncbi.nlm.nih.gov/pubmed/26949266
http://dx.doi.org/10.1016/j.anbehav.2015.12.007
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