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Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes

Data is presented in support of model-based total evidence (MBTE) phylogenetic reconstructions of the Neotropical clade of Gymnotiformes “Model-based total evidence phylogeny of Neotropical electric knifefishes (Teleostei, Gymnotiformes)” (Tagliacollo et al., 2016) [1]). The MBTE phylogenies were in...

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Autores principales: Tagliacollo, Victor A., Bernt, Maxwell J., Craig, Jack M., Oliveira, Claudio, Albert, James S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761620/
https://www.ncbi.nlm.nih.gov/pubmed/26955648
http://dx.doi.org/10.1016/j.dib.2016.01.069
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author Tagliacollo, Victor A.
Bernt, Maxwell J.
Craig, Jack M.
Oliveira, Claudio
Albert, James S.
author_facet Tagliacollo, Victor A.
Bernt, Maxwell J.
Craig, Jack M.
Oliveira, Claudio
Albert, James S.
author_sort Tagliacollo, Victor A.
collection PubMed
description Data is presented in support of model-based total evidence (MBTE) phylogenetic reconstructions of the Neotropical clade of Gymnotiformes “Model-based total evidence phylogeny of Neotropical electric knifefishes (Teleostei, Gymnotiformes)” (Tagliacollo et al., 2016) [1]). The MBTE phylogenies were inferred using a comprehensive dataset comprised of six genes (5277 bp) and 223 morphological characters for an ingroup taxon sample of 120 of 218 valid species and 33 of the 34 extant genera. The data in this article include primer sequences for gene amplification and sequencing, voucher information and GenBank accession numbers, descriptions of morphological characters, morphological synapomorphies for the recognized clades of Gymnotiformes, a supermatrix comprised of concatenated molecular and morphological data, and computer scripts to replicate MBTE inferences. We also included here Maximum-likelihood and Bayesian topologies, which support two main gymnotiform clades: Gymnotidae and Sternopygoidei, the latter comprised of Rhamphichthyoidea (Rhamphichthyidae+Hypopomidae) and Sinusoidea (Sternopygidae+Apteronotidae).
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spelling pubmed-47616202016-03-07 Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes Tagliacollo, Victor A. Bernt, Maxwell J. Craig, Jack M. Oliveira, Claudio Albert, James S. Data Brief Data Article Data is presented in support of model-based total evidence (MBTE) phylogenetic reconstructions of the Neotropical clade of Gymnotiformes “Model-based total evidence phylogeny of Neotropical electric knifefishes (Teleostei, Gymnotiformes)” (Tagliacollo et al., 2016) [1]). The MBTE phylogenies were inferred using a comprehensive dataset comprised of six genes (5277 bp) and 223 morphological characters for an ingroup taxon sample of 120 of 218 valid species and 33 of the 34 extant genera. The data in this article include primer sequences for gene amplification and sequencing, voucher information and GenBank accession numbers, descriptions of morphological characters, morphological synapomorphies for the recognized clades of Gymnotiformes, a supermatrix comprised of concatenated molecular and morphological data, and computer scripts to replicate MBTE inferences. We also included here Maximum-likelihood and Bayesian topologies, which support two main gymnotiform clades: Gymnotidae and Sternopygoidei, the latter comprised of Rhamphichthyoidea (Rhamphichthyidae+Hypopomidae) and Sinusoidea (Sternopygidae+Apteronotidae). Elsevier 2016-02-06 /pmc/articles/PMC4761620/ /pubmed/26955648 http://dx.doi.org/10.1016/j.dib.2016.01.069 Text en © 2016 The AAuthors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Tagliacollo, Victor A.
Bernt, Maxwell J.
Craig, Jack M.
Oliveira, Claudio
Albert, James S.
Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title_full Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title_fullStr Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title_full_unstemmed Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title_short Data supporting phylogenetic reconstructions of the Neotropical clade Gymnotiformes
title_sort data supporting phylogenetic reconstructions of the neotropical clade gymnotiformes
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761620/
https://www.ncbi.nlm.nih.gov/pubmed/26955648
http://dx.doi.org/10.1016/j.dib.2016.01.069
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