Cargando…

Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls

The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by...

Descripción completa

Detalles Bibliográficos
Autores principales: Xu, Jing, Gao, Chao, Zhang, Fang, Ma, Xiaofeng, Peng, Xiaolin, Zhang, Rongxin, Kong, Dexin, Simard, Alain R., Hao, Junwei
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761882/
https://www.ncbi.nlm.nih.gov/pubmed/26898505
http://dx.doi.org/10.1038/srep21819
_version_ 1782417020991569920
author Xu, Jing
Gao, Chao
Zhang, Fang
Ma, Xiaofeng
Peng, Xiaolin
Zhang, Rongxin
Kong, Dexin
Simard, Alain R.
Hao, Junwei
author_facet Xu, Jing
Gao, Chao
Zhang, Fang
Ma, Xiaofeng
Peng, Xiaolin
Zhang, Rongxin
Kong, Dexin
Simard, Alain R.
Hao, Junwei
author_sort Xu, Jing
collection PubMed
description The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by using microarray analysis. From microarray analysis, we listed 310 mRNAs and 114 lncRNAs with the mRMR software classed into two sample groups, GBS patients and healthy controls. KEGG mapping demonstrated that the top seven signal pathways may play important roles in GBS development. Several GO terms, such as cytosol, cellular macromolecular complex assembly, cell cycle, ligase activity, protein catabolic process, etc., were enriched in gene lists, suggesting a potential correlation with GBS development. Co-expression network analysis indicated that 113 lncRNAs and 303 mRNAs were included in the co-expression network. Our present study showed that these differentially expressed mRNAs and lncRNAs may play important roles in GBS development, which provides basic information for defining the mechanism(s) that promote GBS.
format Online
Article
Text
id pubmed-4761882
institution National Center for Biotechnology Information
language English
publishDate 2016
publisher Nature Publishing Group
record_format MEDLINE/PubMed
spelling pubmed-47618822016-02-29 Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls Xu, Jing Gao, Chao Zhang, Fang Ma, Xiaofeng Peng, Xiaolin Zhang, Rongxin Kong, Dexin Simard, Alain R. Hao, Junwei Sci Rep Article The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by using microarray analysis. From microarray analysis, we listed 310 mRNAs and 114 lncRNAs with the mRMR software classed into two sample groups, GBS patients and healthy controls. KEGG mapping demonstrated that the top seven signal pathways may play important roles in GBS development. Several GO terms, such as cytosol, cellular macromolecular complex assembly, cell cycle, ligase activity, protein catabolic process, etc., were enriched in gene lists, suggesting a potential correlation with GBS development. Co-expression network analysis indicated that 113 lncRNAs and 303 mRNAs were included in the co-expression network. Our present study showed that these differentially expressed mRNAs and lncRNAs may play important roles in GBS development, which provides basic information for defining the mechanism(s) that promote GBS. Nature Publishing Group 2016-02-22 /pmc/articles/PMC4761882/ /pubmed/26898505 http://dx.doi.org/10.1038/srep21819 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/
spellingShingle Article
Xu, Jing
Gao, Chao
Zhang, Fang
Ma, Xiaofeng
Peng, Xiaolin
Zhang, Rongxin
Kong, Dexin
Simard, Alain R.
Hao, Junwei
Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title_full Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title_fullStr Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title_full_unstemmed Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title_short Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
title_sort differentially expressed lncrnas and mrnas identified by microarray analysis in gbs patients vs healthy controls
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761882/
https://www.ncbi.nlm.nih.gov/pubmed/26898505
http://dx.doi.org/10.1038/srep21819
work_keys_str_mv AT xujing differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT gaochao differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT zhangfang differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT maxiaofeng differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT pengxiaolin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT zhangrongxin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT kongdexin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT simardalainr differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols
AT haojunwei differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols