Cargando…
Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls
The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761882/ https://www.ncbi.nlm.nih.gov/pubmed/26898505 http://dx.doi.org/10.1038/srep21819 |
_version_ | 1782417020991569920 |
---|---|
author | Xu, Jing Gao, Chao Zhang, Fang Ma, Xiaofeng Peng, Xiaolin Zhang, Rongxin Kong, Dexin Simard, Alain R. Hao, Junwei |
author_facet | Xu, Jing Gao, Chao Zhang, Fang Ma, Xiaofeng Peng, Xiaolin Zhang, Rongxin Kong, Dexin Simard, Alain R. Hao, Junwei |
author_sort | Xu, Jing |
collection | PubMed |
description | The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by using microarray analysis. From microarray analysis, we listed 310 mRNAs and 114 lncRNAs with the mRMR software classed into two sample groups, GBS patients and healthy controls. KEGG mapping demonstrated that the top seven signal pathways may play important roles in GBS development. Several GO terms, such as cytosol, cellular macromolecular complex assembly, cell cycle, ligase activity, protein catabolic process, etc., were enriched in gene lists, suggesting a potential correlation with GBS development. Co-expression network analysis indicated that 113 lncRNAs and 303 mRNAs were included in the co-expression network. Our present study showed that these differentially expressed mRNAs and lncRNAs may play important roles in GBS development, which provides basic information for defining the mechanism(s) that promote GBS. |
format | Online Article Text |
id | pubmed-4761882 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-47618822016-02-29 Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls Xu, Jing Gao, Chao Zhang, Fang Ma, Xiaofeng Peng, Xiaolin Zhang, Rongxin Kong, Dexin Simard, Alain R. Hao, Junwei Sci Rep Article The aim of our present study was to determine whether message RNAs (mRNAs) and long noncoding RNAs (lncRNAs) are expressed differentially in patients with Guillain-Barré syndrome (GBS) compared with healthy controls. The mRNA and lncRNA profiles of GBS patients and healthy controls were generated by using microarray analysis. From microarray analysis, we listed 310 mRNAs and 114 lncRNAs with the mRMR software classed into two sample groups, GBS patients and healthy controls. KEGG mapping demonstrated that the top seven signal pathways may play important roles in GBS development. Several GO terms, such as cytosol, cellular macromolecular complex assembly, cell cycle, ligase activity, protein catabolic process, etc., were enriched in gene lists, suggesting a potential correlation with GBS development. Co-expression network analysis indicated that 113 lncRNAs and 303 mRNAs were included in the co-expression network. Our present study showed that these differentially expressed mRNAs and lncRNAs may play important roles in GBS development, which provides basic information for defining the mechanism(s) that promote GBS. Nature Publishing Group 2016-02-22 /pmc/articles/PMC4761882/ /pubmed/26898505 http://dx.doi.org/10.1038/srep21819 Text en Copyright © 2016, Macmillan Publishers Limited http://creativecommons.org/licenses/by/4.0/ This work is licensed under a Creative Commons Attribution 4.0 International License. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in the credit line; if the material is not included under the Creative Commons license, users will need to obtain permission from the license holder to reproduce the material. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Article Xu, Jing Gao, Chao Zhang, Fang Ma, Xiaofeng Peng, Xiaolin Zhang, Rongxin Kong, Dexin Simard, Alain R. Hao, Junwei Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title | Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title_full | Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title_fullStr | Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title_full_unstemmed | Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title_short | Differentially expressed lncRNAs and mRNAs identified by microarray analysis in GBS patients vs healthy controls |
title_sort | differentially expressed lncrnas and mrnas identified by microarray analysis in gbs patients vs healthy controls |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4761882/ https://www.ncbi.nlm.nih.gov/pubmed/26898505 http://dx.doi.org/10.1038/srep21819 |
work_keys_str_mv | AT xujing differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT gaochao differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT zhangfang differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT maxiaofeng differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT pengxiaolin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT zhangrongxin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT kongdexin differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT simardalainr differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols AT haojunwei differentiallyexpressedlncrnasandmrnasidentifiedbymicroarrayanalysisingbspatientsvshealthycontrols |