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Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ
Guanine is the most easily oxidized of the four DNA bases, and contiguous guanines (GG) in a sequence are more readily oxidized than a single guanine in a sequence. Continued oxidation of GGs results in a contiguous oxidized guanine lesion. Two contiguous 2,5-diamino-4H-imidazol-4-ones, an oxidized...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4763079/ https://www.ncbi.nlm.nih.gov/pubmed/26491064 http://dx.doi.org/10.1093/jb/mvv103 |
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author | Suzuki, Masayo Kino, Katsuhito Kawada, Taishu Oyoshi, Takanori Morikawa, Masayuki Kobayashi, Takanobu Miyazawa, Hiroshi |
author_facet | Suzuki, Masayo Kino, Katsuhito Kawada, Taishu Oyoshi, Takanori Morikawa, Masayuki Kobayashi, Takanobu Miyazawa, Hiroshi |
author_sort | Suzuki, Masayo |
collection | PubMed |
description | Guanine is the most easily oxidized of the four DNA bases, and contiguous guanines (GG) in a sequence are more readily oxidized than a single guanine in a sequence. Continued oxidation of GGs results in a contiguous oxidized guanine lesion. Two contiguous 2,5-diamino-4H-imidazol-4-ones, an oxidized form of guanine that hydrolyses to 2,2,4-triamino-5(2H)-oxazolone (Oz), are detected following the oxidation of GG. In this study, we analysed translesion synthesis (TLS) across two contiguous Oz molecules (OzOz) using Klenow Fragment exo(−) (KF exo(−)) and DNA polymerases (Pols) α, β, ζ, η, ι, κ and REV1. We found that KF exo(−) and Pols α, β, ι and REV1 inserted one nucleotide opposite the 3′ Oz of OzOz and stalled at the subsequent extension, and that Pol κ incorporated no nucleotide. Pol η only inefficiently elongated the primer up to full-length across OzOz; the synthesis of most DNA strands stalled at the 3′ or 5′ Oz of OzOz. Surprisingly, however, Pol ζ efficiently extended the primer up to full-length across OzOz, unlike the other DNA polymerases, but catalysed error-prone nucleotide incorporation. We therefore believe that Pol ζ is required for efficient TLS of OzOz. These results show that OzOz obstructs DNA synthesis by DNA polymerases except Pol ζ. |
format | Online Article Text |
id | pubmed-4763079 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-47630792016-02-24 Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ Suzuki, Masayo Kino, Katsuhito Kawada, Taishu Oyoshi, Takanori Morikawa, Masayuki Kobayashi, Takanobu Miyazawa, Hiroshi J Biochem Regular Papers Guanine is the most easily oxidized of the four DNA bases, and contiguous guanines (GG) in a sequence are more readily oxidized than a single guanine in a sequence. Continued oxidation of GGs results in a contiguous oxidized guanine lesion. Two contiguous 2,5-diamino-4H-imidazol-4-ones, an oxidized form of guanine that hydrolyses to 2,2,4-triamino-5(2H)-oxazolone (Oz), are detected following the oxidation of GG. In this study, we analysed translesion synthesis (TLS) across two contiguous Oz molecules (OzOz) using Klenow Fragment exo(−) (KF exo(−)) and DNA polymerases (Pols) α, β, ζ, η, ι, κ and REV1. We found that KF exo(−) and Pols α, β, ι and REV1 inserted one nucleotide opposite the 3′ Oz of OzOz and stalled at the subsequent extension, and that Pol κ incorporated no nucleotide. Pol η only inefficiently elongated the primer up to full-length across OzOz; the synthesis of most DNA strands stalled at the 3′ or 5′ Oz of OzOz. Surprisingly, however, Pol ζ efficiently extended the primer up to full-length across OzOz, unlike the other DNA polymerases, but catalysed error-prone nucleotide incorporation. We therefore believe that Pol ζ is required for efficient TLS of OzOz. These results show that OzOz obstructs DNA synthesis by DNA polymerases except Pol ζ. Oxford University Press 2016-03 2015-10-21 /pmc/articles/PMC4763079/ /pubmed/26491064 http://dx.doi.org/10.1093/jb/mvv103 Text en © The Authors 2015. Published by Oxford University Press on behalf of the Japanese Biochemical Society. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Regular Papers Suzuki, Masayo Kino, Katsuhito Kawada, Taishu Oyoshi, Takanori Morikawa, Masayuki Kobayashi, Takanobu Miyazawa, Hiroshi Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title | Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title_full | Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title_fullStr | Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title_full_unstemmed | Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title_short | Contiguous 2,2,4-triamino-5(2H)-oxazolone obstructs DNA synthesis by DNA polymerases α, β, η, ι, κ, REV1 and Klenow Fragment exo(−), but not by DNA polymerase ζ |
title_sort | contiguous 2,2,4-triamino-5(2h)-oxazolone obstructs dna synthesis by dna polymerases α, β, η, ι, κ, rev1 and klenow fragment exo(−), but not by dna polymerase ζ |
topic | Regular Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4763079/ https://www.ncbi.nlm.nih.gov/pubmed/26491064 http://dx.doi.org/10.1093/jb/mvv103 |
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