Cargando…
The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population
A previous genome-wide association study (GWAS) has found that some common variations in the BARD1 gene were associated with neuroblastoma susceptibility especially for high-risk subjects, and the associations have been validated in Caucasians and African-Americans. However, the associations between...
Autores principales: | , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Ivyspring International Publisher
2016
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4764780/ https://www.ncbi.nlm.nih.gov/pubmed/26941572 http://dx.doi.org/10.7150/ijms.13426 |
_version_ | 1782417437475471360 |
---|---|
author | Zhang, Ruizhong Zou, Yan Zhu, Jinhong Zeng, Xinhao Yang, Tianyou Wang, Fenghua He, Jing Xia, Huimin |
author_facet | Zhang, Ruizhong Zou, Yan Zhu, Jinhong Zeng, Xinhao Yang, Tianyou Wang, Fenghua He, Jing Xia, Huimin |
author_sort | Zhang, Ruizhong |
collection | PubMed |
description | A previous genome-wide association study (GWAS) has found that some common variations in the BARD1 gene were associated with neuroblastoma susceptibility especially for high-risk subjects, and the associations have been validated in Caucasians and African-Americans. However, the associations between BARD1 gene polymorphisms and neuroblastoma susceptibility have not been studied among Asians, not to mention Chinese subjects. In the present study, we investigated the association of three BARD1 polymorphisms (rs7585356 G>A, rs6435862 T>G and rs3768716 A>G) with neuroblastoma susceptibility in 201 neuroblastoma patients and 531 controls using TaqMan methodology. Overall, none of these polymorphisms was significantly associated with neuroblastoma susceptibility. However, stratified analysis showed a more profound association between neuroblastoma risk and rs6435862 TG/GG variant genotypes among older children (adjusted OR=1.55, 95% CI=1.04-2.31), and children with adrenal gland-originated disease (adjusted OR=2.94, 95% CI=1.40-6.18), or with ISSN clinical stages III+IV disease (adjusted OR=1.75, 95% CI=1.09-2.84). Similar results were observed for the variant genotypes of rs3768716 A>G polymorphism among these three subgroups. Our results suggest that the BARD1 rs6435862 T>G and rs3768716 A>G polymorphisms may contribute to increased susceptibility to neuroblastoma, especially for the subjects at age ≥12 months, with adrenal gland-originated or with late clinical stage neuroblastoma. These findings need further validation by prospective studies with larger sample size with subjects enrolled from multicenter, involving different ethnicities. |
format | Online Article Text |
id | pubmed-4764780 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Ivyspring International Publisher |
record_format | MEDLINE/PubMed |
spelling | pubmed-47647802016-03-03 The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population Zhang, Ruizhong Zou, Yan Zhu, Jinhong Zeng, Xinhao Yang, Tianyou Wang, Fenghua He, Jing Xia, Huimin Int J Med Sci Research Paper A previous genome-wide association study (GWAS) has found that some common variations in the BARD1 gene were associated with neuroblastoma susceptibility especially for high-risk subjects, and the associations have been validated in Caucasians and African-Americans. However, the associations between BARD1 gene polymorphisms and neuroblastoma susceptibility have not been studied among Asians, not to mention Chinese subjects. In the present study, we investigated the association of three BARD1 polymorphisms (rs7585356 G>A, rs6435862 T>G and rs3768716 A>G) with neuroblastoma susceptibility in 201 neuroblastoma patients and 531 controls using TaqMan methodology. Overall, none of these polymorphisms was significantly associated with neuroblastoma susceptibility. However, stratified analysis showed a more profound association between neuroblastoma risk and rs6435862 TG/GG variant genotypes among older children (adjusted OR=1.55, 95% CI=1.04-2.31), and children with adrenal gland-originated disease (adjusted OR=2.94, 95% CI=1.40-6.18), or with ISSN clinical stages III+IV disease (adjusted OR=1.75, 95% CI=1.09-2.84). Similar results were observed for the variant genotypes of rs3768716 A>G polymorphism among these three subgroups. Our results suggest that the BARD1 rs6435862 T>G and rs3768716 A>G polymorphisms may contribute to increased susceptibility to neuroblastoma, especially for the subjects at age ≥12 months, with adrenal gland-originated or with late clinical stage neuroblastoma. These findings need further validation by prospective studies with larger sample size with subjects enrolled from multicenter, involving different ethnicities. Ivyspring International Publisher 2016-02-03 /pmc/articles/PMC4764780/ /pubmed/26941572 http://dx.doi.org/10.7150/ijms.13426 Text en © Ivyspring International Publisher. Reproduction is permitted for personal, noncommercial use, provided that the article is in whole, unmodified, and properly cited. See http://ivyspring.com/terms for terms and conditions. |
spellingShingle | Research Paper Zhang, Ruizhong Zou, Yan Zhu, Jinhong Zeng, Xinhao Yang, Tianyou Wang, Fenghua He, Jing Xia, Huimin The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title | The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title_full | The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title_fullStr | The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title_full_unstemmed | The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title_short | The Association between GWAS-identified BARD1 Gene SNPs and Neuroblastoma Susceptibility in a Southern Chinese Population |
title_sort | association between gwas-identified bard1 gene snps and neuroblastoma susceptibility in a southern chinese population |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4764780/ https://www.ncbi.nlm.nih.gov/pubmed/26941572 http://dx.doi.org/10.7150/ijms.13426 |
work_keys_str_mv | AT zhangruizhong theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zouyan theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zhujinhong theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zengxinhao theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT yangtianyou theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT wangfenghua theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT hejing theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT xiahuimin theassociationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zhangruizhong associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zouyan associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zhujinhong associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT zengxinhao associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT yangtianyou associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT wangfenghua associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT hejing associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation AT xiahuimin associationbetweengwasidentifiedbard1genesnpsandneuroblastomasusceptibilityinasouthernchinesepopulation |