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Bridging the divide: a model-data approach to Polar and Alpine microbiology

Advances in microbial ecology in the cryosphere continue to be driven by empirical approaches including field sampling and laboratory-based analyses. Although mathematical models are commonly used to investigate the physical dynamics of Polar and Alpine regions, they are rarely applied in microbial...

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Autores principales: Bradley, James A., Anesio, Alexandre M., Arndt, Sandra
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765003/
https://www.ncbi.nlm.nih.gov/pubmed/26832206
http://dx.doi.org/10.1093/femsec/fiw015
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author Bradley, James A.
Anesio, Alexandre M.
Arndt, Sandra
author_facet Bradley, James A.
Anesio, Alexandre M.
Arndt, Sandra
author_sort Bradley, James A.
collection PubMed
description Advances in microbial ecology in the cryosphere continue to be driven by empirical approaches including field sampling and laboratory-based analyses. Although mathematical models are commonly used to investigate the physical dynamics of Polar and Alpine regions, they are rarely applied in microbial studies. Yet integrating modelling approaches with ongoing observational and laboratory-based work is ideally suited to Polar and Alpine microbial ecosystems given their harsh environmental and biogeochemical characteristics, simple trophic structures, distinct seasonality, often difficult accessibility, geographical expansiveness and susceptibility to accelerated climate changes. In this opinion paper, we explain how mathematical modelling ideally complements field and laboratory-based analyses. We thus argue that mathematical modelling is a powerful tool for the investigation of these extreme environments and that fully integrated, interdisciplinary model-data approaches could help the Polar and Alpine microbiology community address some of the great research challenges of the 21st century (e.g. assessing global significance and response to climate change). However, a better integration of field and laboratory work with model design and calibration/validation, as well as a stronger focus on quantitative information is required to advance models that can be used to make predictions and upscale processes and fluxes beyond what can be captured by observations alone.
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spelling pubmed-47650032016-03-04 Bridging the divide: a model-data approach to Polar and Alpine microbiology Bradley, James A. Anesio, Alexandre M. Arndt, Sandra FEMS Microbiol Ecol Current Opinion Advances in microbial ecology in the cryosphere continue to be driven by empirical approaches including field sampling and laboratory-based analyses. Although mathematical models are commonly used to investigate the physical dynamics of Polar and Alpine regions, they are rarely applied in microbial studies. Yet integrating modelling approaches with ongoing observational and laboratory-based work is ideally suited to Polar and Alpine microbial ecosystems given their harsh environmental and biogeochemical characteristics, simple trophic structures, distinct seasonality, often difficult accessibility, geographical expansiveness and susceptibility to accelerated climate changes. In this opinion paper, we explain how mathematical modelling ideally complements field and laboratory-based analyses. We thus argue that mathematical modelling is a powerful tool for the investigation of these extreme environments and that fully integrated, interdisciplinary model-data approaches could help the Polar and Alpine microbiology community address some of the great research challenges of the 21st century (e.g. assessing global significance and response to climate change). However, a better integration of field and laboratory work with model design and calibration/validation, as well as a stronger focus on quantitative information is required to advance models that can be used to make predictions and upscale processes and fluxes beyond what can be captured by observations alone. Oxford University Press 2016-01-31 2016-03-01 /pmc/articles/PMC4765003/ /pubmed/26832206 http://dx.doi.org/10.1093/femsec/fiw015 Text en © FEMS 2016. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Current Opinion
Bradley, James A.
Anesio, Alexandre M.
Arndt, Sandra
Bridging the divide: a model-data approach to Polar and Alpine microbiology
title Bridging the divide: a model-data approach to Polar and Alpine microbiology
title_full Bridging the divide: a model-data approach to Polar and Alpine microbiology
title_fullStr Bridging the divide: a model-data approach to Polar and Alpine microbiology
title_full_unstemmed Bridging the divide: a model-data approach to Polar and Alpine microbiology
title_short Bridging the divide: a model-data approach to Polar and Alpine microbiology
title_sort bridging the divide: a model-data approach to polar and alpine microbiology
topic Current Opinion
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765003/
https://www.ncbi.nlm.nih.gov/pubmed/26832206
http://dx.doi.org/10.1093/femsec/fiw015
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