High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.

Strain FF12(T) was isolated from the mouth of a West African lungfish (Protopterus annectens) in Senegal. MALDI-TOF-MS did not provide any identification. This strain exhibited a 97.97% 16S rRNA sequence identity with Kaistella flava. Using a polyphasic study including phenotypic and genomic analyse...

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Autores principales: Lo, C.I., Sankar, S.A., Mediannikov, O., Ehounoud, C.B., Labas, N., Faye, N., Raoult, D., Fournier, P.-E., Fenollar, F.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2016
Materias:
New Microbes in Humans
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765742/
https://www.ncbi.nlm.nih.gov/pubmed/26933502
http://dx.doi.org/10.1016/j.nmni.2016.01.004
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author Lo, C.I.
Sankar, S.A.
Mediannikov, O.
Ehounoud, C.B.
Labas, N.
Faye, N.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_facet Lo, C.I.
Sankar, S.A.
Mediannikov, O.
Ehounoud, C.B.
Labas, N.
Faye, N.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
author_sort Lo, C.I.
collection PubMed
description Strain FF12(T) was isolated from the mouth of a West African lungfish (Protopterus annectens) in Senegal. MALDI-TOF-MS did not provide any identification. This strain exhibited a 97.97% 16S rRNA sequence identity with Kaistella flava. Using a polyphasic study including phenotypic and genomic analyses, strain FF12(T) is Gram-negative, aero-anaerobic, oxidase-positive, non-motile, non-spore-forming, and exhibited a genome of 4,397,629 bp with a G+C content of 35.1% that coded 4,001 protein-coding and 55 RNA genes. On the basis of these data, we propose the creation of Chryseobacterium senegalense strain FF12(T).
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spelling pubmed-47657422016-03-01 High-quality genome sequence and description of Chryseobacterium senegalense sp. nov. Lo, C.I. Sankar, S.A. Mediannikov, O. Ehounoud, C.B. Labas, N. Faye, N. Raoult, D. Fournier, P.-E. Fenollar, F. New Microbes New Infect New Microbes in Humans Strain FF12(T) was isolated from the mouth of a West African lungfish (Protopterus annectens) in Senegal. MALDI-TOF-MS did not provide any identification. This strain exhibited a 97.97% 16S rRNA sequence identity with Kaistella flava. Using a polyphasic study including phenotypic and genomic analyses, strain FF12(T) is Gram-negative, aero-anaerobic, oxidase-positive, non-motile, non-spore-forming, and exhibited a genome of 4,397,629 bp with a G+C content of 35.1% that coded 4,001 protein-coding and 55 RNA genes. On the basis of these data, we propose the creation of Chryseobacterium senegalense strain FF12(T). Elsevier 2016-01-22 /pmc/articles/PMC4765742/ /pubmed/26933502 http://dx.doi.org/10.1016/j.nmni.2016.01.004 Text en © 2016 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle New Microbes in Humans
Lo, C.I.
Sankar, S.A.
Mediannikov, O.
Ehounoud, C.B.
Labas, N.
Faye, N.
Raoult, D.
Fournier, P.-E.
Fenollar, F.
High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title_full High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title_fullStr High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title_full_unstemmed High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title_short High-quality genome sequence and description of Chryseobacterium senegalense sp. nov.
title_sort high-quality genome sequence and description of chryseobacterium senegalense sp. nov.
topic New Microbes in Humans
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765742/
https://www.ncbi.nlm.nih.gov/pubmed/26933502
http://dx.doi.org/10.1016/j.nmni.2016.01.004
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