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Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus

Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. He...

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Autores principales: Sharma, Gaurav, Narwani, Tarun, Subramanian, Srikrishna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765838/
https://www.ncbi.nlm.nih.gov/pubmed/26900859
http://dx.doi.org/10.1371/journal.pone.0148593
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author Sharma, Gaurav
Narwani, Tarun
Subramanian, Srikrishna
author_facet Sharma, Gaurav
Narwani, Tarun
Subramanian, Srikrishna
author_sort Sharma, Gaurav
collection PubMed
description Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. Here we report a 9.5 Mbp complete genome of Myxococcus hansupus that encodes 7,753 proteins. Phylogenomic and genome-genome distance based analysis suggest that Myxococcus hansupus is a novel member of the genus Myxococcus. Comparative genome analysis with other members of the genus Myxococcus was performed to explore their genome diversity. The variation in number of unique proteins observed across different species is suggestive of diversity at the genus level while the overrepresentation of several Pfam families indicates the extent and mode of genome expansion as compared to non-Myxococcales δ-proteobacteria.
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spelling pubmed-47658382016-03-07 Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus Sharma, Gaurav Narwani, Tarun Subramanian, Srikrishna PLoS One Research Article Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. Here we report a 9.5 Mbp complete genome of Myxococcus hansupus that encodes 7,753 proteins. Phylogenomic and genome-genome distance based analysis suggest that Myxococcus hansupus is a novel member of the genus Myxococcus. Comparative genome analysis with other members of the genus Myxococcus was performed to explore their genome diversity. The variation in number of unique proteins observed across different species is suggestive of diversity at the genus level while the overrepresentation of several Pfam families indicates the extent and mode of genome expansion as compared to non-Myxococcales δ-proteobacteria. Public Library of Science 2016-02-22 /pmc/articles/PMC4765838/ /pubmed/26900859 http://dx.doi.org/10.1371/journal.pone.0148593 Text en © 2016 Sharma et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sharma, Gaurav
Narwani, Tarun
Subramanian, Srikrishna
Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title_full Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title_fullStr Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title_full_unstemmed Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title_short Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
title_sort complete genome sequence and comparative genomics of a novel myxobacterium myxococcus hansupus
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765838/
https://www.ncbi.nlm.nih.gov/pubmed/26900859
http://dx.doi.org/10.1371/journal.pone.0148593
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