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Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus
Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. He...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2016
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765838/ https://www.ncbi.nlm.nih.gov/pubmed/26900859 http://dx.doi.org/10.1371/journal.pone.0148593 |
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author | Sharma, Gaurav Narwani, Tarun Subramanian, Srikrishna |
author_facet | Sharma, Gaurav Narwani, Tarun Subramanian, Srikrishna |
author_sort | Sharma, Gaurav |
collection | PubMed |
description | Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. Here we report a 9.5 Mbp complete genome of Myxococcus hansupus that encodes 7,753 proteins. Phylogenomic and genome-genome distance based analysis suggest that Myxococcus hansupus is a novel member of the genus Myxococcus. Comparative genome analysis with other members of the genus Myxococcus was performed to explore their genome diversity. The variation in number of unique proteins observed across different species is suggestive of diversity at the genus level while the overrepresentation of several Pfam families indicates the extent and mode of genome expansion as compared to non-Myxococcales δ-proteobacteria. |
format | Online Article Text |
id | pubmed-4765838 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2016 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-47658382016-03-07 Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus Sharma, Gaurav Narwani, Tarun Subramanian, Srikrishna PLoS One Research Article Myxobacteria, a group of Gram-negative aerobes, belong to the class δ-proteobacteria and order Myxococcales. Unlike anaerobic δ-proteobacteria, they exhibit several unusual physiogenomic properties like gliding motility, desiccation-resistant myxospores and large genomes with high coding density. Here we report a 9.5 Mbp complete genome of Myxococcus hansupus that encodes 7,753 proteins. Phylogenomic and genome-genome distance based analysis suggest that Myxococcus hansupus is a novel member of the genus Myxococcus. Comparative genome analysis with other members of the genus Myxococcus was performed to explore their genome diversity. The variation in number of unique proteins observed across different species is suggestive of diversity at the genus level while the overrepresentation of several Pfam families indicates the extent and mode of genome expansion as compared to non-Myxococcales δ-proteobacteria. Public Library of Science 2016-02-22 /pmc/articles/PMC4765838/ /pubmed/26900859 http://dx.doi.org/10.1371/journal.pone.0148593 Text en © 2016 Sharma et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Sharma, Gaurav Narwani, Tarun Subramanian, Srikrishna Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title | Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title_full | Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title_fullStr | Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title_full_unstemmed | Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title_short | Complete Genome Sequence and Comparative Genomics of a Novel Myxobacterium Myxococcus hansupus |
title_sort | complete genome sequence and comparative genomics of a novel myxobacterium myxococcus hansupus |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4765838/ https://www.ncbi.nlm.nih.gov/pubmed/26900859 http://dx.doi.org/10.1371/journal.pone.0148593 |
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